Protein
MCA_04311_1
Length
776 amino acids
Browser: contigC:2672192-2674591+
RNA-seq: read pairs 1456, FPKM 23.2, percentile rank 45.4% (100% = highest expression)
Protein function
| KEGG: | K12837 | U2AF2 | splicing factor U2AF 65 kDa subunit |
|---|---|---|---|
| EGGNOG: | 0PJ8F | FG07049.1 | splicing factor U2AF |
| SGD closest match: | S000001557 | MUD2 | Splicing factor MUD2 |
| CGD closest match: | CAL0000187516 | orf19.5828 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01973_1 | 31.49% | 543 | 1e-57 | MIA_01973_1 |
| A0A0J9X2F6_GEOCN | 30.34% | 501 | 2e-52 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA01s01143g PE=4 SV=1 |
| UniRef50_A0A0J9X2F6 | 30.34% | 501 | 4e-49 | Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X2F6_GEOCN |
| A0A167ETY0_9ASCO | 29.86% | 278 | 2e-25 | Uncharacterized protein OS=Sugiyamaella lignohabitans GN=AWJ20_2039 PE=4 SV=1 |
| A0A1E3PHP5_9ASCO | 29.93% | 304 | 3e-24 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_52716 PE=4 SV=1 |
| Q6C6F8_YARLI | 24.40% | 496 | 1e-23 | YALI0E09889p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E09889g PE=4 SV=1 |
| A0A060T6S0_BLAAD | 22.11% | 493 | 2e-18 | ARAD1B14366p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B14366g PE=4 SV=1 |
| A0A1D8PGR8_CANAL | 26.74% | 187 | 4e-13 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.5828 PE=4 SV=1 |
| MUD2_YEAST | 43.18% | 44 | 4e-06 | Splicing factor MUD2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MUD2 PE=1 SV=3 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0356
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
600
700
776
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
cd12232 (RRM3_U2AF65)
-
mobidb-lite (disord...)
Residue annotation
-
polypeptide substr...
Protein sequence
>MCA_04311_1 MSDYWDNESSRFGDDRNDRDKSRKQRDLERERRRNERDSEWASSSSDRRSRDSDRHGRDRDHSRDSRDDWDRDRERRYRD DYDSHSRRRRDRSGRDRERDSRRRRDRSRSSSPSVFRARLRYSKVSDEDLANVIPINERVRKQSFWDVARKGFEKVPAEL AKRSGYFNLRGDTKPPREDLLRGLVDPAILSQIAVPSINPRGRPGNMVVVNPNFGNNNYNNQNNYNNNNNNNFGNSRFSN NNNNNNNGFAYNNNNNQNQMNRGVNNSVTTETEDQANLYDTRLSPKNSRAARRVIISGFKNDESNSVTPEAITEYLTEAL GSIRLVKTTKDVEVKNEEANKQPGTASVTTALSTTSVKKVFVPSVDQVVLDCQFSKDGNKIIVELASGELATLAITFNNS PFQGISGQWIMNIRRPGDYIIPEPINAEIEENHVLSVRQTLEKRQEIEAMLQEKKSIKKDEQQEEEEEDEYSGVDNSTKE KLETVDCRVIDSKDKLYVADLPFYLTRPQILELFLAFGDVEALEIVQDRDQQYPPPWGETRGIAFVQYKRKKNVNNNNEE DESSLNDENNDVTMQAMRKLNGMTLGNDNVLRCGLACVGRESGLASLPLEMAGFSQLVNKVKNGDHPNRFNNEEEAGIYH DSPVLELLNMVSPEELLDDKEYKEIKEDIQQECCKYGQVVDVVVPRPNDSINLSTFSNINNNNNSNNNNGTIDKKVNESN NNKKSLEELGIGKVYVKFDSLQSCQAAFKGLGGRQFNGRTVISTFFPEDNFNLGIY
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
Cellular Component
None predicted.