Protein
MCA_04288_1
Length
200 amino acids
Gene name: RLP24
Description: Ribosome biogenesis protein RLP24
Browser: contigC:2604925-2605597+
RNA-seq: read pairs 1150, FPKM 70.7, percentile rank 72.9% (100% = highest expression)
Protein function
| Annotation: | RLP24 | Ribosome biogenesis protein RLP24 | |
|---|---|---|---|
| KEGG: | K02896 | RP-L24e | large subunit ribosomal protein L24e |
| EGGNOG: | 0PH0Y | RLP24 | ribosome biogenesis protein RLP24 |
| SGD closest match: | S000003999 | RLP24 | Ribosome biogenesis protein RLP24 |
| CGD closest match: | CAL0000179590 | RLP24 | ATPase-activating ribosome biosynthesis protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01577_1 | 86.33% | 139 | 5e-81 | MIA_01577_1 |
| A0A0J9YH73_GEOCN | 82.73% | 139 | 4e-75 | Similar to Saccharomyces cerevisiae YLR009W RPL24 Essential protein with similarity to Rpl24Ap and Rpl24Bp OS=Geotrichum candidum GN=BN980_GECA01s00274g PE=4 SV=1 |
| A0A1E3PLW7_9ASCO | 79.86% | 139 | 9e-74 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_45795 PE=4 SV=1 |
| A0A060TAT6_BLAAD | 79.14% | 139 | 6e-72 | ARAD1B09812p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B09812g PE=4 SV=1 |
| UniRef50_K0KRU0 | 78.42% | 139 | 2e-68 | Ribosome biogenesis protein n=8 Tax=Dikarya TaxID=451864 RepID=K0KRU0_WICCF |
| RLP24_YARLI | 76.26% | 139 | 1e-69 | Ribosome biogenesis protein RLP24 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=RLP24 PE=3 SV=1 |
| RLP24_YEAST | 79.14% | 139 | 3e-68 | Ribosome biogenesis protein RLP24 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RLP24 PE=1 SV=1 |
| Q59SI1_CANAL | 76.26% | 139 | 2e-67 | ATPase-activating ribosome biosynthesis protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RLP24 PE=4 SV=1 |
| A0A167E4V5_9ASCO | 83.33% | 120 | 4e-59 | Rlp24p OS=Sugiyamaella lignohabitans GN=RLP24 PE=4 SV=1 |
| A0A1E4TLY5_9ASCO | 78.57% | 98 | 4e-38 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_30820 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.5969
Predicted cleavage: 58
Protein family membership
- Ribosomal protein L24e-related (IPR000988)
Domains and repeats
-
Domain
1
20
40
60
80
100
120
140
160
180
200
200
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
SSF57716 (Glucocort...)
-
mobidb-lite (disord...)
Residue annotation
-
zinc binding site ...
-
L3 interface cd00472
-
L14 interface cd00...
-
23S rRNA interface...
Protein sequence
>MCA_04288_1 MRIETCHFCSAPIYPGHGIMFVRNDAKQFRFCRAKCHKNFKLKRNPRKLRWTKAFRKAAGKEMVVDKTLEFSARRNVPVR YNRELVQQTLQAMTRIEEIRKKRERAFYKNRMSKNKEIQKALDKKLVESNPELLRIRDVELKRAAAKKAKKEAEMEISED EEEEEVEEVSMDEMEESEEEEERQKVAISLKNKKKKKATA
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.