Protein
MCA_04240_1
Length
729 amino acids
Browser: contigC:2458129-2460378-
RNA-seq: read pairs 3218, FPKM 54.5, percentile rank 67.1% (100% = highest expression)
Protein function
| EGGNOG: | 0PG2E | PGUG_02592 | nuclear envelope pore membrane protein POM 121 |
|---|---|---|---|
| SGD closest match: | S000004327 | NUP2 | Nucleoporin NUP2 |
| CGD closest match: | CAL0000185600 | orf19.6665 | Nucleoporin |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_02208_1 | 53.49% | 129 | 1e-31 | MIA_02208_1 |
| A0A167EQE3_9ASCO | 49.62% | 131 | 5e-32 | Nucleoporin NUP2 OS=Sugiyamaella lignohabitans GN=NUP2 PE=4 SV=1 |
| UniRef50_A0A167EQE3 | 49.62% | 131 | 1e-28 | Nucleoporin NUP2 n=1 Tax=Sugiyamaella lignohabitans TaxID=796027 RepID=A0A167EQE3_9ASCO |
| A0A060T999_BLAAD | 49.62% | 133 | 2e-29 | ARAD1C36388p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C36388g PE=4 SV=1 |
| A0A1E3PFV7_9ASCO | 47.69% | 130 | 5e-28 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_43209 PE=4 SV=1 |
| A0A1E4TDX9_9ASCO | 42.67% | 150 | 1e-27 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_43643 PE=4 SV=1 |
| Q6CD46_YARLI | 39.50% | 119 | 7e-25 | YALI0C03850p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C03850g PE=4 SV=1 |
| A0A0J9X2E5_GEOCN | 39.34% | 122 | 6e-17 | Similar to Saccharomyces cerevisiae YJL041W NSP1 FG-nucleoporin component of central core of the nuclear pore complex (NPC) OS=Geotrichum candidum GN=BN980_GECA01s00439g PE=4 SV=1 |
| A0A1D8PNP6_CANAL | 35.71% | 112 | 6e-15 | Nucleoporin OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.6665 PE=4 SV=1 |
| NUP2_YEAST | 32.17% | 115 | 1e-10 | Nucleoporin NUP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NUP2 PE=1 SV=2 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0301
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
600
729
Detailed signature matches
no IPR
Unintegrated signatures
-
-
cd13170 (RanBD_NUP50)
-
mobidb-lite (disord...)
Residue annotation
-
putative RAN bindi...
Protein sequence
>MCA_04240_1 MKKRSSDNQISREEPDDRDEPIDPVRRADESVLSKRKILVPKRRMAGNQSSTGSSFGGTNNVFSSLSSTTSNPAPSNPFG SLTSTGSTTQSDSSKPLFSFGSTQAQNPVPNSSSTSAPLFSFSAKPEVSKPLFSSASTTSSSTEPPKFSFSTDGGFGSKA TESVNNTSSNSLFQNSSTTTSTTSNGSTTSGLFQFNKPSTTAPPAKPLFGAPAPAPTAKTTETPVQSTGISGSDDAKKIK FRALNEKFLEKISTLVKENAYADLTSVVQTYIKFSGQINSNSIQDTDKPTASTANSQLPKENKTSSLFSQSKPSASLFSK PAESTAEKKEDDKPSLFPTSQIPQIKSNTFSFKPSAPKKDEEQKDAISEKPTTSVPEAPKFQFGVTPTSNTTDASEKSNE SKENKKDESENKEESKSATPLFSFTPKPADSAPPATFSFSKPAAQNHTWSPEKGIQFATPSSKDDKSNDNSKDEGSTTPA FTPKPFSFGSSTTSSAPFKFGASTSDSSSGFKFTAGTTSTSTNNSSSGGLFGSTNTSTTTTPGLFGGASSANGNGVAKPF SFSFGKKPEETTSTTSEKPDTPSAATPTAETSKEEPKEDGTADGEEEKEASNNSDLTAKGPGEEDEDSLYEKKTKIYQVE GSTPKQMGLGLLRVLKHKTTNKTRVLVRAEPSGRVLLNTLLRSSFKYNANGPSVSVMSVTEEGKPVTYLLRVKTPADASE LANILETNK
GO term prediction
Biological Process
GO:0046907 intracellular transport
Molecular Function
None predicted.
Cellular Component
GO:0005643 nuclear pore