Protein
MCA_04200_1
Length
972 amino acids
Gene name: SWC3
Description: SWR1-complex protein 3
Browser: contigC:2329172-2332091+
RNA-seq: read pairs 2334, FPKM 29.6, percentile rank 52.5% (100% = highest expression)
Protein function
| Annotation: | SWC3 | SWR1-complex protein 3 | |
|---|---|---|---|
| EGGNOG: | 0PFFM | SWC3 | Component of the SWR1 complex which mediates the ATP- dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Involved in chromosome stability |
| SGD closest match: | S000000009 | SWC3 | SWR1-complex protein 3 |
| CGD closest match: | CAL0000188338 | orf19.188 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_02635_1 | 56.74% | 215 | 5e-63 | MIA_02635_1 |
| A0A0J9X737_GEOCN | 53.60% | 222 | 3e-61 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA04s03222g PE=4 SV=1 |
| UniRef50_A0A0J9X737 | 53.60% | 222 | 6e-58 | Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X737_GEOCN |
| A0A060SY35_BLAAD | 61.82% | 110 | 2e-39 | ARAD1A13530p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A13530g PE=4 SV=1 |
| A0A167E474_9ASCO | 58.95% | 95 | 3e-33 | Swc3p OS=Sugiyamaella lignohabitans GN=SWC3 PE=4 SV=1 |
| Q6CAD9_YARLI | 51.49% | 101 | 2e-24 | YALI0D03663p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D03663g PE=4 SV=1 |
| SWC3_YEAST | 36.61% | 112 | 4e-14 | SWR1-complex protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SWC3 PE=1 SV=2 |
| A0A1E3PQB0_9ASCO | 46.94% | 49 | 1e-10 | Uncharacterized protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_32410 PE=3 SV=1 |
| A0A1D8PH76_CANAL | 42.19% | 64 | 2e-07 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.188 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.5728
Protein family membership
None predicted.
Domains and repeats
None predicted.
Detailed signature matches
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_04200_1 MAKRKRSLNDTASSRSRKSRASQTTTTDPTLEGPPPPIEPVVPHYPYSSDSGIPLSDTVPDVSLLEQPLSLKESFSLSHS LAQSRNKWLSGAMFTKYWTRPPRGRKLQEGEVNAREKMSKLCECVMVIGPHIFETKLFLVKDEEADSKTDTEQENLSKPT VSTSGVETDNLAEPIVQNSNDKTTDSSGPHNIDHNKDTSIVKSSNDLNSALPLNHQQRVNSSEDSSKVIETDKPKDPVRD QESMATDPSLNIDTKKTTPSDKAPNNTTIEPTPSSITTKSTTDNHSNTNTTGRQSLQSVITSSAETAKESASTQPVSLPD SSPKPINTTPLNTNSDSKKSTFTNTFLAPGSSTSGANSSLSSSNISKATSSSNTINTVSQTTTASSSSIKPNSALISTPK SATNSSDPKTTKLTTTAKPAPANANSSNTNSISSNHENVQTILKLQAIARINLSLNSLMKIVASGHGTHEQISEFQGYIN RVKTIELEDIPKYFTPDGPKTSLDTQKGSISSSTPKPVPKPRIPSIPSSSQGLTSNASSSSASTPHKLDTKQIKAPRIPK TPRTPKTPKAPKEKKSREPKTAKRKYDDKPKSTVGRKKKDPSKPKSPYVSKKQQRRVTIVFEFKDNPADRYIIPKNSIIE ILPTNEVLVSFFLTFPEGGRSATTKVLPPGNMKMVKSEGESSFQDGSKPSELNNQAISKPEDQSTTSSQSPQPPQDNPNK QLNDTLDNSRSVSQDPGSLQKELYYPLTVTIRDIPVKSLPILERSVHKESEVNKYMKDVLEHGTRAKDWWVWFQIDQRDE ELLEKLIQPARPPENMFVPARVRVYKSKKKSKSGASKNKDEESHGKDEEEEDEDSQVKQESTDTSTINNFTSNTGSQDVD MIDFNSNNAKDHSFAQSTPTSVIDTTLLNHKSDAVSNSSSQPPAIGQPKVEAVGFDIDNMQSDKMKASSLLAEREADEFL NIPEDEPPAGIN
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.