Protein
MCA_04195_1
Length
570 amino acids
Browser: contigC:2319631-2321344+
RNA-seq: read pairs 3054, FPKM 66.1, percentile rank 71.3% (100% = highest expression)
Protein function
| KEGG: | K14308 | NUP54 | nuclear pore complex protein Nup54 |
|---|---|---|---|
| EGGNOG: | 0PI8F | PGUG_05444 | nucleoporin |
| SGD closest match: | S000003351 | NUP57 | Nucleoporin NUP57 |
| CGD closest match: | CAL0000187887 | CAALFM_CR02610CA | FG-nucleoporin |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_02630_1 | 64.66% | 283 | 5e-126 | MIA_02630_1 |
| A0A0J9XHA8_GEOCN | 56.78% | 273 | 8e-99 | Similar to Saccharomyces cerevisiae YGR119C NUP57 Nucleoporin OS=Geotrichum candidum GN=BN980_GECA16s03090g PE=4 SV=1 |
| A0A161HGM1_9ASCO | 55.52% | 281 | 2e-99 | FG-nucleoporin NUP57 OS=Sugiyamaella lignohabitans GN=NUP57 PE=4 SV=1 |
| UniRef50_A0A161HGM1 | 55.52% | 281 | 4e-96 | FG-nucleoporin NUP57 n=2 Tax=Saccharomycetales TaxID=4892 RepID=A0A161HGM1_9ASCO |
| A0A060T2K0_BLAAD | 50.53% | 281 | 6e-91 | ARAD1A09020p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A09020g PE=4 SV=1 |
| Q6CGB3_YARLI | 48.92% | 278 | 6e-83 | YALI0A20702p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A20702g PE=4 SV=1 |
| A0A1E4THC2_9ASCO | 39.01% | 282 | 2e-68 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_57479 PE=4 SV=1 |
| A0A1D8PS91_CANAL | 33.82% | 275 | 2e-38 | FG-nucleoporin OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CAALFM_CR02610CA PE=4 SV=1 |
| NUP57_YEAST | 31.20% | 266 | 8e-39 | Nucleoporin NUP57 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NUP57 PE=1 SV=1 |
| A0A1E3PLS4_9ASCO | 46.98% | 149 | 6e-38 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_45861 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0061
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Repeat
1
100
200
300
400
500
570
Detailed signature matches
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)
Protein sequence
>MCA_04195_1 MSGAGFQFGNNSNTNKPLFGSTPSNTTSGGLFGNNTNTTGGFGTNNSTTGGGLFGSNNTASKPNSTPIFGGNTNTSSSGS NLFGNANTNTNTAGGGLFGKNNNTTSTSGLFNNNNNNTNANTTGGGLFGSNNNSNVTGTTGGLFGNNNTTNNTGGSLFGS KPATNTGTSLFGGNNTTNTNTGGGLFGGNNAANTNTGGGLFSGNQNNNTTGNGLFGNQNASTNSGNAFGAGANTNSASAG LFGNAISNNNQLNQSQQLQQSQMQPQFPVQQDPNQYLRRNNGEPSILEQLGKIQSAWDPASPQCAFQFFFYNKVSKQEAL LHEKPAAIEQSKWDEAIEKRPDDSYVPALAIGFTDLQKRIKVQDQTVALYQQRMHEINDKLVALCQKHDLTTTVKFSQMK MRHEKLVHRTLSLAAKIQVLRSRGYVLRPDEEVLKKKLESLIKQIDDPAVFGRINEIWARLTVLSERARSLASKNGRLGT AGFGSDDDDLNNGGNDADRNNGDDDAVRAMLTELDWNRDEEQLEKLAKVLKEQQEGISFLAEVLQKDTAQVDDIIEDLIY GKNKVKSDPW
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.