Protein
MCA_04190_1
Length
334 amino acids
Browser: contigC:2310878-2312085-
RNA-seq: read pairs 8935, FPKM 329.6, percentile rank 92.4% (100% = highest expression)
Protein function
| EGGNOG: | 0QDTD | FG09556.1 | RNP domain protein |
|---|---|---|---|
| SGD closest match: | S000000967 | PAB1 | Polyadenylate-binding protein, cytoplasmic and nuclear |
| CGD closest match: | CAL0000188539 | SBP1 | Sbp1p |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_02624_1 | 45.26% | 95 | 2e-24 | MIA_02624_1 |
| A0A0J9XD80_GEOCN | 47.42% | 97 | 9e-23 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA10s03200g PE=4 SV=1 |
| UniRef50_A0A0J9XD80 | 47.42% | 97 | 2e-19 | Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XD80_GEOCN |
| A0A060T499_BLAAD | 32.71% | 107 | 4e-10 | ARAD1C02904p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C02904g PE=4 SV=1 |
| A0A167EUV0_9ASCO | 28.00% | 100 | 2e-07 | Uncharacterized protein OS=Sugiyamaella lignohabitans GN=AWJ20_2081 PE=4 SV=1 |
| Q5ANP6_CANAL | 31.43% | 105 | 8e-07 | Sbp1p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SBP1 PE=4 SV=1 |
| A0A1E4TA22_9ASCO | 27.68% | 112 | 2e-06 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_125704 PE=4 SV=1 |
| PABP_YEAST | 22.55% | 102 | 9e-06 | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PAB1 PE=1 SV=4 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0419
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
300
334
Detailed signature matches
no IPR
Unintegrated signatures
-
-
cd00590 (RRM_SF)
-
mobidb-lite (disord...)
Protein sequence
>MCA_04190_1 MSTTTETVAASVQPTEPSVEQQQTSSDPHRIFLGNLPVNTDDEKIVSFLEGFKVEKVIIPKPRFKKAIKFAFVDLSSQEE VDKVVGTMNEKPLEERPITVKPAHPKESQEKQRKPKSARQRRTSASASGAEKSDAAETASKPKSSKKKKASKKTTEASES NADSEDSESAKGDNSTKTAKSKKKAKGPKARPQRIPDDISHLDSVHVRNLAPRISNDELKEHFAELSPVWAISTFKRVRS QKDNRLLFLRYGFVKFKDTETQQKAIKQFNDTNLKNRKIHVTAVHERTDKTGTASAEDASAAANTEDATKEPKEESKEES KEEPKATTTSETKA
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
Cellular Component
None predicted.