Protein
MCA_04181_1
Length
477 amino acids
Browser: contigC:2291546-2292980+
RNA-seq: read pairs 4631, FPKM 119.7, percentile rank 81.8% (100% = highest expression)
Protein function
| EGGNOG: | 0PJC6 | FG08873.1 | UPF0016 domain protein |
|---|---|---|---|
| SGD closest match: | S000000391 | GDT1 | GCR1-dependent translation factor 1 |
| CGD closest match: | CAL0000189844 | GDT1 | Putative ribosome biosynthesis protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_02411_1 | 60.33% | 484 | 8e-176 | MIA_02411_1 |
| A0A0J9XD12_GEOCN | 52.32% | 474 | 3e-145 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA10s01627g PE=4 SV=1 |
| UniRef50_A0A0J9XD12 | 52.32% | 474 | 7e-142 | Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XD12_GEOCN |
| A0A060T9K6_BLAAD | 52.88% | 278 | 1e-85 | ARAD1D19052p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D19052g PE=4 SV=1 |
| A0A167CWG0_9ASCO | 51.46% | 274 | 6e-81 | Gdt1p OS=Sugiyamaella lignohabitans GN=GDT1 PE=4 SV=1 |
| A0A1E3PRU1_9ASCO | 48.06% | 283 | 5e-75 | UPF0016-domain-containing protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_19193 PE=4 SV=1 |
| A0A1D8PH63_CANAL | 45.61% | 285 | 6e-70 | Putative ribosome biosynthesis protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=GDT1 PE=4 SV=1 |
| A0A1E4TKP1_9ASCO | 43.42% | 281 | 4e-67 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_21075 PE=4 SV=1 |
| Q6CCR1_YARLI | 40.70% | 285 | 3e-62 | YALI0C07304p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C07304g PE=4 SV=1 |
| GDT1_YEAST | 43.64% | 275 | 7e-58 | GCR1-dependent translation factor 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GDT1 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.3787
Protein family membership
- Gdt1 family (IPR001727)
Domains and repeats
None predicted.
Detailed signature matches
no IPR
Unintegrated signatures
-
CYTOPLASMIC_D... (C...)
-
-
NON_CYTOPLASM... (N...)
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SIGNAL_PEPTIDE (Sig...)
-
SIGNAL_PEPTID... (S...)
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SIGNAL_PEPTID... (S...)
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SIGNAL_PEPTID... (S...)
-
-
-
TRANSMEMBRANE (Tran...)
-
mobidb-lite (disord...)
Protein sequence
>MCA_04181_1 MRVSPTVVTFLSILSVSSAAVISPGNIDVSKGTDVIPPDSKEAEALHAADKASKFAPKDNTFVENFDKANTFKKPEPKVS DQKIDVPDNESLTPTDKKKKVAATKDDKNPVVVNDYDPNNMGVSSEGKTKAQEHADKDADHETLESTPKVAADEPSEALA QEAVEDPDSISQSSSLVSSKDHAVKTTEKFTPPLEEDPDRGHALLVSISMTVLSEIGDKTFLIAAIMAMRYKRLTVFTSA YSALVLMSVISGFIGHAVPKLLSRKTSAFIAGALFTFFGVSLLREAFAMDKNAGVEEELEEVESEINATTHTTDLELGLA DQDEKQGANPPSIKRSASNPRISEDGLDTQAGDASLYIPRPRRNGSGGLIGTLKRVSEGLGNLFGLILSPIWVQCFAMTF FAEWGDRSQVATIAMAAGSDYLWVIIGTIFGHFLCTLSAVIGGKLLATRITLRNVSLTGGFLFLIFALVYFYEYFST
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.