Protein

MCA_04139_1

Length
399 amino acids


Browser: contigC:2159181-2160381+

RNA-seq: read pairs 8378, FPKM 258.8, percentile rank 90.7% (100% = highest expression)

Protein function

KEGG:K14319RANGAP1 Ran GTPase-activating protein 1
EGGNOG:0PGV5PGUG_00648Ran GTPase activating protein 1
SGD closest match:S000004848RNA1Ran GTPase-activating protein 1
CGD closest match:CAL0000191775RNA1GTPase-activating protein

Protein alignments

%idAln lengthE-value
MIA_02845_171.61%3980.0MIA_02845_1
A0A0J9X2Z7_GEOCN68.93%3385e-169Similar to Saccharomyces cerevisiae YMR235C RNA1 GTPase activating protein (GAP) for Gsp1p OS=Geotrichum candidum GN=BN980_GECA01s07457g PE=4 SV=1
A0A060T6X8_BLAAD64.60%3393e-154ARAD1C17160p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C17160g PE=4 SV=1
A0A1E3PK16_9ASCO58.16%3377e-147RNI-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_50934 PE=4 SV=1
A0A167DYZ7_9ASCO58.27%3934e-144Rna1p OS=Sugiyamaella lignohabitans GN=RNA1 PE=4 SV=1
Q6CEX2_YARLI53.59%3347e-125YALI0B12210p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B12210g PE=4 SV=1
UniRef50_A0A1U7LV3051.78%3384e-117Ran GTPase-activating protein 1 n=2 Tax=Taphrinomycotina TaxID=451866 RepID=A0A1U7LV30_9ASCO
A0A1E4TBG8_9ASCO52.73%3302e-114Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_3693 PE=4 SV=1
A0A1D8PJD7_CANAL48.67%3392e-103GTPase-activating protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RNA1 PE=4 SV=1
RNA1_YEAST41.18%3408e-77Ran GTPase-activating protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RNA1 PE=1 SV=2

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0194

Protein family membership

None predicted.

Domains and repeats

  1. Repeat
1 50 100 150 200 250 300 350 399

Detailed signature matches

    1. PF13516 (LRR_6)
Unintegrated signatures no IPR
Unintegrated signatures
  1. SM00368 (LRR_RI_2)
  2. SSF52047 (RNI-like)
  3. cd00116 (LRR_RI)
  4. mobidb-lite (disord...)

Residue annotation

  1. Leucine-rich repea...
  2. Substrate binding ...

Protein sequence

>MCA_04139_1
MSDDTIFSIENKGLKLDTAEDVKPYADQIKGMKNLKQVIIKGNTIGVEASKALAEVLKNQDHLESVDFSDIYTGRLKEEI
PPSLDYLLSALLTCKNLHTVNLSDNAFGIMTIDPLEKFLSQHTPLEHLYLANNGFGPEAGARIGAALESLAEAKRKTGSS
PDLVTVICGRNRLENGSMEAWSKFISAHGTIKDLRIPQNGIRQEGIEYLLLNGLSKSPKLEKLDLQDNTFTLKGAKAFAT
ALPNWPKIKDIGISDCLLSARGGELLAEAILVAGVLDNLEHIRLQYNEIEAEGAKRLTEAIKSNVPNLKLLELNGNKFPE
DHELVDVLNQLFEERGFGEIDELDDMEMDSSDEESESDEEEEEAEVVLKDAEEEEDRNVAQDKSKSVEGLADTLSKTEL

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0005515 protein binding

Cellular Component

None predicted.