Protein

MCA_04067_1

Length
226 amino acids

Description: protein with Homeobox domain

Browser: contigC:1938387-1939287-

RNA-seq: read pairs 159, FPKM 8.7, percentile rank 23.6% (100% = highest expression)

Protein function

Annotation:protein with Homeobox domain

Protein alignments

%idAln lengthE-value

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.2053

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 50 100 150 200 226

Detailed signature matches

  1. Domain IPR009057
    Homeobox domain-like
    1. SSF46689 (Homeodoma...)
  2. Domain IPR001356
    Homeobox domain
    1. SM00389 (HOX_1)
    2. PS50071 (HOMEOBOX_2)
    3. cd00086 (homeodomain)
    4. PF00046 (Homeobox)
Unintegrated signatures no IPR
Unintegrated signatures
  1. G3DSA:1.10.10.60
  2. mobidb-lite (disord...)

Residue annotation

  1. DNA binding site c...
  2. specific DNA base ...

Protein sequence

>MCA_04067_1
MIAKQEFPYLNHINKSFTFPIENKSIRLKFFENVLGDSLSSKIMSINAISMPYLLCPSLFKPFRMTQLLEFSFEILKLSS
LKQTIHSLNMQATINVKKMIIIVELFLQYRLRVCNLRKCMEHSIIALFQNESKKSKYQIIDSTKQTIKDEAAKQATFFET
WDSRFAILLLEESFRASRYITKAGIDNLTRLTSLSPKQIKTWFANKRRKSRKLASSTQTNPSQSEE

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003677 DNA binding

Cellular Component

None predicted.