Protein
MCA_04057_1
Length
726 amino acids
Gene name: RAD7
Description: DNA repair protein RAD7; Nucleotide excision repair (NER) protein
Browser: contigC:1894139-1896388+
RNA-seq: read pairs 1150, FPKM 19.5, percentile rank 40.8% (100% = highest expression)
Protein function
| Annotation: | RAD7 | DNA repair protein RAD7; Nucleotide excision repair (NER) protein | |
|---|---|---|---|
| KEGG: | K15082 | RAD7 | DNA repair protein RAD7 |
| EGGNOG: | 0QE70 | PGUG_03161 | repair protein |
| SGD closest match: | S000003813 | RAD7 | DNA repair protein RAD7 |
| CGD closest match: | CAL0000199257 | RAD7 | UV-damaged DNA-binding protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_02572_1 | 57.88% | 565 | 0.0 | MIA_02572_1 |
| A0A0J9XBG2_GEOCN | 46.39% | 554 | 3e-172 | Similar to Saccharomyces cerevisiae YJR052W RAD7 Protein that recognizes and binds damaged DNA in an ATP-dependent manner (With Rad16p) during nucleotide excision repair OS=Geotrichum candidum GN=BN980_GECA06s05147g PE=4 SV=1 |
| UniRef50_A0A0J9XBG2 | 46.39% | 554 | 7e-169 | Similar to Saccharomyces cerevisiae YJR052W RAD7 Protein that recognizes and binds damaged DNA in an ATP-dependent manner (With Rad16p) during nucleotide excision repair n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XBG2_GEOCN |
| A0A161HF81_9ASCO | 38.51% | 496 | 6e-96 | UV-damaged DNA-binding protein RAD7 OS=Sugiyamaella lignohabitans GN=RAD7 PE=4 SV=1 |
| A0A1D8PGH5_CANAL | 37.18% | 476 | 5e-92 | UV-damaged DNA-binding protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RAD7 PE=4 SV=1 |
| Q6C8A8_YARLI | 37.68% | 422 | 3e-92 | YALI0D21208p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D21208g PE=4 SV=1 |
| A0A060SWG3_BLAAD | 37.91% | 422 | 3e-88 | ARAD1A04444p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A04444g PE=4 SV=1 |
| A0A1E3PRY6_9ASCO | 32.38% | 562 | 2e-78 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_81163 PE=4 SV=1 |
| A0A1E4TGC2_9ASCO | 32.66% | 447 | 7e-65 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_2482 PE=4 SV=1 |
| RAD7_YEAST | 33.10% | 432 | 4e-60 | DNA repair protein RAD7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RAD7 PE=1 SV=3 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.9572
Predicted cleavage: 12
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Repeat
1
100
200
300
400
500
600
726
Detailed signature matches
-
-
SM00367 (LRR_CC_2)
-
no IPR
Unintegrated signatures
-
-
SSF52047 (RNI-like)
-
mobidb-lite (disord...)
Protein sequence
>MCA_04057_1 MRRFVRKSERNNQEIQTSTQSHVRGPNSALTEFLRERNIDANAIRLRHQERQNQARANSTDPSNSDEGGRPSTEPTEQQD SDVEIVDQEPTTSSSTTTTTTGTKRKRLSKEKEKQRSKAEQRRLNRSRRERKNIAPEDDDQEDEFSSDDPGYNSAGNRVR RSRRRNRQRDVFQNDENNETLFRIQHGNQGRLPGQTDFCARCHCKFTVTVYSESAPPELQQEIIVEETVVAENREEDDEE NSDTPAREDQENTTTTTTTTTKKKVTRLAGTLLLCPACSKEQLEKGKQSRAAAAHDEAVKNSKMYRRKVAAAILDRQDYK NVPTLRSICINVIQDNIQDVEALGGIGDDNRDRIARILARNRKLDSESVKIFLEPTVRKLELWDCSQINSTSLNLIPQYC PHLESLTLSMCGQLDSSFLTRCSSMSNLTSISLDGAFLVSSDSWAKFFEQIGNKLTRLDIRNTHRFDAKALQALVDNCAQ GLTHLTLNRMSGLDDPAAFFALSKLTNLVHLEYSHPPQELVLAKDRTLFTDEIIIEILNSVGSQLHTLILDGCAELTDKF IINGVKPCCSPLRMRKLSLGQLDLLTDEVVADLFHSWNDLLVSTKTVPILTDVSLERCIGLGDDTVDALFELARPSLVSL NLSALPDLGEDPFIRAFVGEDVAKFKSLENLNLSFVRSVTNSTITAIAENSPWLEFIEVFGNPKINKNCVVRKGVKLIGR QDIFDL
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.