Protein
MCA_04049_1
Length
928 amino acids
Browser: contigC:1873839-1876626-
RNA-seq: read pairs 948, FPKM 12.6, percentile rank 30.2% (100% = highest expression)
Protein function
| EGGNOG: | 0PGMH | PGUG_05214 | complex, subunit |
|---|---|---|---|
| SGD closest match: | S000001716 | RSC4 | Chromatin structure-remodeling complex subunit RSC4 |
| CGD closest match: | CAL0000193582 | orf19.239 | RSC chromatin remodeling complex ATPase subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_02215_1 | 37.94% | 340 | 1e-50 | MIA_02215_1 |
| A0A060TDA8_BLAAD | 32.84% | 201 | 6e-31 | ARAD1D41888p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D41888g PE=4 SV=1 |
| UniRef50_A0A060TDA8 | 32.84% | 201 | 2e-27 | ARAD1D41888p n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060TDA8_BLAAD |
| A0A0J9XCN5_GEOCN | 43.41% | 129 | 4e-24 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA09s04278g PE=4 SV=1 |
| A0A1E3PIA6_9ASCO | 29.85% | 201 | 6e-23 | Bromodomain-domain-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_51745 PE=4 SV=1 |
| A0A167E079_9ASCO | 29.50% | 200 | 1e-19 | Rsc4p OS=Sugiyamaella lignohabitans GN=RSC4 PE=4 SV=1 |
| Q6C3T3_YARLI | 27.67% | 206 | 3e-18 | YALI0E32307p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E32307g PE=4 SV=1 |
| A0A1E4TKV6_9ASCO | 30.69% | 189 | 2e-17 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_30556 PE=4 SV=1 |
| RSC4_YEAST | 24.88% | 217 | 1e-11 | Chromatin structure-remodeling complex subunit RSC4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RSC4 PE=1 SV=2 |
| A0A1D8PJG4_CANAL | 34.62% | 78 | 2e-09 | RSC chromatin remodeling complex ATPase subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.239 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1419
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
600
700
800
928
Detailed signature matches
no IPR
Unintegrated signatures
-
-
cd04369 (Bromodomain)
-
mobidb-lite (disord...)
Residue annotation
-
acetyllysine bindi...
Protein sequence
>MCA_04049_1 MASSNKRKASSAGLSDREARSRKPPASNTASRSKSITLSSTDPSYSIDDYFNDLWNNLHSSFSSSELSPFEQLPSKDDYP EYYTTIESPICLSQIKQKFDNHEYSSIDDIINDFSLLCNNALTFNDRFSDLYNLAQSIHAHIHIFAIVQKVPIEYKEYAR QILQEEVRILNEVERYRQRVKNASKTYIADSFLELPSKAEYPSYYKVIKTPVSIDSVRQLICDGKMLDFDYFYTMTNLIF TNAQTFNDEKSAIYQDSLTLQKTFNFRFERAQNRFIQKLNDAKSEFATLDHQLYIKWVSKFNYKTAKIIPLKQTKDVPVE ENTPSRPKRSSSSNGVLKIKLKTGSGSPPSSPAIPKIRLKNSSSLSTTTESLEENKRPTTPHKIKLNLKPPTTPTTKSNA SSTGSTLKKSLEEKEKEEEEKDLPSSGNKRFPTKIRLSLDSKNSKNKSTPTKQSTTTTTTTTTETTEEINISEKNEKEKE EQSVKTNERSTRVKSRKSQTPINGNNKTDATNIIDRKKDKTESIKEAIDSKTPAEDEDKTKLDDSKIEEEKEKETTLNGS ATKEETGESVNAPKAVVEVPEIELKETEPEKKEDVQLVNREEEELARKQAELKAEQEKLSLMRNPYRRDSTESISDALFQ YISVSSFIPTLSKYHLAKHPVPPPQRLSFFQLHFPVSETFKERTFAFWVPYYHKVLTIKTLLHPSLNKRHYVQTLSRDMG STSINPYFSSATSLLSDPKAPITSRFEVELKPGLNMIDLTVVASPLVELSDEEDDDEEEEDSTKKKEEKSNDENKTEKEE EEKSNDDTKKVVEPNNKPEPRKPITRAEAMSAAASLSSTPTPISKQSNNDNNNNSSESVTPSSKTPIAATPTTATTAAIT TPSKSTPVNGLSRSSSVVAKELKSRHFEMGDNVVTERLTLWITLGSSP
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.