Protein

MCA_04002_1

Length
1,007 amino acids

Gene name: RSM22

Description: Probable S-adenosyl-L-methionine-dependent RNA methyltransferase RSM22, mitochondrial

Browser: contigC:1745840-1748864+

RNA-seq: read pairs 997, FPKM 12.2, percentile rank 29.6% (100% = highest expression)

Protein function

Annotation:RSM22Probable S-adenosyl-L-methionine-dependent RNA methyltransferase RSM22, mitochondrial
EGGNOG:0PH29RSM2237S ribosomal protein RSM22
SGD closest match:S000001638RSM22Probable S-adenosyl-L-methionine-dependent RNA methyltransferase RSM22, mitochondrial
CGD closest match:CAL0000174389RSM22Mitochondrial 37S ribosomal protein RSM22

Protein alignments

%idAln lengthE-value
MIA_01990_148.02%3796e-100MIA_01990_1
A0A0J9XH46_GEOCN47.04%3893e-90Similar to Saccharomyces cerevisiae YKL155C RSM22 Mitochondrial ribosomal protein of the small subunit OS=Geotrichum candidum GN=BN980_GECA16s00593g PE=4 SV=1
UniRef50_A0A0J9XH4647.04%3896e-87Similar to Saccharomyces cerevisiae YKL155C RSM22 Mitochondrial ribosomal protein of the small subunit n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XH46_GEOCN
A0A167EAA3_9ASCO48.02%2023e-48Mitochondrial 37S ribosomal protein RSM22 OS=Sugiyamaella lignohabitans GN=RSM22 PE=4 SV=1
A0A060T3H1_BLAAD46.77%1861e-47ARAD1C37312p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C37312g PE=4 SV=1
A0A1E4TDY4_9ASCO33.52%3522e-47Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_97832 PE=4 SV=1
A0A1E3PHH4_9ASCO52.49%1817e-44Mitochondrial ribosomal protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_52439 PE=4 SV=1
RT22_YEAST39.27%1913e-33Probable S-adenosyl-L-methionine-dependent RNA methyltransferase RSM22, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RSM22 PE=1 SV=1
Q5A2C7_CANAL40.10%1921e-29Mitochondrial 37S ribosomal protein RSM22 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RSM22 PE=4 SV=1
Q6C8U5_YARLI38.30%1881e-29YALI0D16929p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D16929g PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.7930
Predicted cleavage: 54

Protein family membership

Domains and repeats

  1. Domain
1 100 200 300 400 500 600 700 800 900 1007

Detailed signature matches

  1. Family IPR015324
    Ribosomal protein Rsm22-like
    1. PF09243 (Rsm22)
  2. Domain IPR015943
    WD40/YVTN repeat-like-containing domain
    1. G3DSA:2.130.1...
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. NON_CYTOPLASM... (N...)
  3. SIGNAL_PEPTIDE (Sig...)
  4. SIGNAL_PEPTID... (S...)
  5. SIGNAL_PEPTID... (S...)
  6. SIGNAL_PEPTID... (S...)
  7. mobidb-lite (disord...)

Protein sequence

>MCA_04002_1
MSITKYSNYCSLRSKLSSTLSTFTQLRLLHASSCSYNNSQIGRPTTLPYAHRAVPETFATLVTEHDTQLEKQGKKPPTVI
SLDDLVKHQDHAYSLQAEKLVRQQELAEKLQREEIDPDLYTFDPWSGHTVFHDSVPEKPLTLDENLYQSFAANINDDRFD
ESTLVGKSTGSRMLVMRESLADAINQPLLQYFNPQKIRAQAAKYYVDLQTDPTRPKAKRKGDSIIKTKTNQNQKNNNNNK
SNSLHGSGGFHKPAIEPLDVDAHVAGVFLQNYASIFSVLTETRNRMNTKRLEAYKQQEEQLDKDTPKEPYTPWRPRRILD
VGFGPATGMVALNEVMASDIDWVPEKKTAVVIGHPYMTKRAKMILQCQRHEMLEKVFPDRYPTAPISKKKEEKSPSEEPK
QSKKQKQKTEEESATTASEESQQQDVQQKQTQEREIFTEITQQVPLNATGTMAEKKKYDLIMVTHQLYRGSGNFPESVDA
RVNQLLPLLAPDGVLIILERGDPHGFEAIARARQVMFRPEDQTEPAPPGTEKSPRVWKGSRNIKPVDLFPKDQSETGASS
TTSPTETNTTKDLEDIETKPFTQEEIDEFDLPPELLEEFDVVEEVEEPTSNNQQQQPKIVADQDTFFKLQVLAPCTHHAK
CPLQIGVENRDRDTSGKFSWCKFGQVVQRPKFSLELKKGIFLATKWSASDSGKGLSGKGLAGKGRPYGNSYETANYSYLS
VYRPPVNAPDSQQTSSSSALEGNSRIMQTPLKRDGHVIMQVCTAQGQISQWIVPKSYSKQAYHDARKSSGGDLWALGSKT
KLDQKSNQTKLDALLQQQLERKLKQQQQKSSSGNNNNNNKNKKENDIETTTTGFSSSARPSKQPQNYESLNKDNGDEINR
KDLADLDSVVPLSPLPPSSPTSTSNNNNLLTPSSRDAHYTDAWTSRADKRKKFRLERKLLRNIAREQKLKNEAMLRGIDV
DQFPTHKAYSDDSFFFPGYEPLSDDLADHYGTKEPSEIIHNKNKSKK

GO term prediction

Biological Process

GO:0006412 translation

Molecular Function

GO:0005515 protein binding
GO:0008168 methyltransferase activity

Cellular Component

None predicted.