Protein
MCA_04000_1
Length
1,278 amino acids
Description: protein with DDE superfamily endonuclease and DNA-binding HTH (CenpB-type) domains
Browser: contigC:1740215-1744052+
RNA-seq: read pairs 48, FPKM 0.5, percentile rank 6.7% (100% = highest expression)
Protein function
| Annotation: | protein with DDE superfamily endonuclease and DNA-binding HTH (CenpB-type) domains | ||
|---|---|---|---|
| EGGNOG: | 0PGYM | PGUG_05847 | centromeric DNA binding |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01898_1 | 70.13% | 154 | 6e-68 | MIA_01898_1 |
| UniRef50_O14423 | 38.30% | 141 | 4e-22 | CENP-B homolog protein 1 n=1 Tax=Schizosaccharomyces pombe (strain 972 / ATCC 24843) TaxID=284812 RepID=CBH1_SCHPO |
| A0A167E511_9ASCO | 34.06% | 138 | 9e-16 | CENP-B protein 2 OS=Sugiyamaella lignohabitans GN=cbh2 PE=4 SV=1 |
| A0A0J9X8E8_GEOCN | 34.72% | 144 | 5e-12 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA05s02199g PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0910
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
200
400
600
800
1000
1278
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_04000_1 MAAHSEERLKITVAQKKAIRSYFKAQNPKLGHKHIKEWFKMTYGVELPFSTISNILSPKFNHLDSLGSDHDENKRCRPPK YPDLEIALSECILRSKNNGQDITGTMLLTLAYEIWPHIPAYRNMSCPGLSGGWVEKFKARHKFKQRLVVGEAASAYSSIP SPTSNINNNNNNSSSSSSLSNIATFSQQQQQQQQPLSQNDNIQPPHFPTHSRSSSTSSIPYSPAYGSNRNTSRAPHPGRA LSASSISIANQAAARIAASKQTVENLLQRIAAFPADDVFSMSETQLAYRLLPNSSELKSSMASKETLGHVTVALACNSTG TQLLKPWVIGHYKSPRALPIISYTNSNNTTNQNNSSTNNNNNNNNNIFNDSYDGSNHMNNNDQNEFIRPKFSGKSNNNNN NNDTYGYNSTTNPNPNINHSLNLGDVQYSSNILAWMTLVEWKKWLKWFDNEMGAQNRKALLILDPFKCHEIGARLMTEAQ ELKNTEIHFLPGNISHIHSPLEQGILQNFKANYRRDLTKFLCDYYQGNITAPVFEDDDNDDNGNDPQEQESSVSIKQESG YNRRDDLMLPPKVPVNFNYNYNNYSKNNADLMDSNQRNTNTNLGIANTPTPPLDSFSTYTKQEPADSSTDELNFPHNAIN IYFALHWINKAWKAIPPGLIRDSWNRSSLLDNTTESSLMSGYSGHYNQSNLQYGPGFILSDTYNSLVNNINYLKQHVPHL LPDEQMLSTEYYIYPNEELVIENSQDHIQLATAQFQIECDEPIINSKRFLKQFLRAIALAISFERLDESPDETYIEQLEK CQQDINFRLELVKTNQEFTIGELDVQIPQQQQQQQQLQQQHHQPQNLMHSSLSELSAATPVFASDDGYGLRSLSSPHDQQ LQPGYSPKRRRTNSQGSFGSRRLSSASSMVPMCSSNTSTVSSSGMGYSSSNTSMSRANSFSSGGGLTFSPSSNSNNAMQQ ATMTFNLPNGVMISPTSTTGGNLALQQQQASSQGMQGPNPYHAARHSLPVNTLMNTSSSPYSSLSSYEYSPKSVSINTSS TPMTSNNPLSSPITPTTAMSSNRTRSSTGSIPYHPGTTFLPSPTASSSVGALLNTATTTPPGTSSSYSFQLPNPSPIGMT YGSIGAISSNTTNIKMEPPSSPTSHHSSLLPPPSLNTPSTPHQISYNYNSQSNNNGSISYQQQQQQQNENNFAPNQFSRS SLGGYMSTVGQVNTLTATMNNMSDIGGSSLTGANNQSNGLSLNWNPATGQPTNTNQAPNNNQNNVAATAEQVHHWQYR
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
Cellular Component
None predicted.