Protein
MCA_03993_1
Length
881 amino acids
Gene name: RIM21
Description: pH-response regulator protein palH/RIM21
Browser: contigC:1717315-1719961-
RNA-seq: read pairs 6420, FPKM 89.9, percentile rank 77.1% (100% = highest expression)
Protein function
| Annotation: | RIM21 | pH-response regulator protein palH/RIM21 | |
|---|---|---|---|
| EGGNOG: | 0PFGZ | RIM21 | pH-response regulator protein palH RIM21 |
| SGD closest match: | S000005238 | RIM21 | pH-response regulator protein palH/RIM21 |
| CGD closest match: | CAL0000199829 | RIM21 | pH-response regulator protein palH/RIM21 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01632_1 | 50.00% | 318 | 3e-101 | MIA_01632_1 |
| A0A0J9XCL4_GEOCN | 45.91% | 318 | 1e-85 | Similar to Saccharomyces cerevisiae YNL294C RIM21 pH sensor molecule, component of the RIM101 pathway, has a role in cell wall construction and alkaline pH response OS=Geotrichum candidum GN=BN980_GECA09s02309g PE=4 SV=1 |
| UniRef50_A0A0J9XCL4 | 45.91% | 318 | 3e-82 | Similar to Saccharomyces cerevisiae YNL294C RIM21 pH sensor molecule, component of the RIM101 pathway, has a role in cell wall construction and alkaline pH response n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XCL4_GEOCN |
| A0A060T8L5_BLAAD | 39.14% | 327 | 2e-73 | ARAD1C37928p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C37928g PE=4 SV=1 |
| Q6CDM4_YARLI | 31.46% | 391 | 2e-58 | YALI0B22814p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B22814g PE=4 SV=1 |
| A0A1E4TGR4_9ASCO | 33.33% | 264 | 5e-39 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_2663 PE=4 SV=1 |
| PALH_CANAL | 30.77% | 273 | 3e-33 | pH-response regulator protein palH/RIM21 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RIM21 PE=3 SV=1 |
| A0A167C771_9ASCO | 29.29% | 338 | 7e-32 | Rim21p OS=Sugiyamaella lignohabitans GN=RIM21 PE=4 SV=1 |
| A0A1E3PS61_9ASCO | 25.38% | 260 | 5e-25 | PalH-domain-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_48773 PE=4 SV=1 |
| PALH_YEAST | 25.95% | 370 | 3e-21 | pH-response regulator protein palH/RIM21 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RIM21 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.8263
Predicted cleavage: 47
Protein family membership
- PalH/RIM21 (IPR014844)
Domains and repeats
None predicted.
Detailed signature matches
-
-
PF08733 (PalH)
-
no IPR
Unintegrated signatures
-
CYTOPLASMIC_D... (C...)
-
NON_CYTOPLASM... (N...)
-
-
TRANSMEMBRANE (Tran...)
-
mobidb-lite (disord...)
Protein sequence
>MCA_03993_1 MNTGLSISSISNSNLIQVPASTLFNSILTTNSLTNPPRSVGIYSRSTATPSPTQQVSVSSDPVIHHDSQYNRHKITKEPN LVKRFDIWRNDDTTNYNMPACNTLILSGGVLIYDGTIIDLNNGEISTYSPSSTVPTPTQTPESFPSATAPNAAVTAYGEQ TYGNKDKRNSRPTDSTTIDIPPAAGAAATDADTGSNDDSSISKLPSRYLIQSNLNKKTQITPPMEATYTPICMNQRPVAG YLPDVKGLNKQRVPDYKHLDPRHIPNLVETQHEDWQAWTNSDGAFSTSLFPLIYSMAGSTALSVVITFLSLVFHQRKRSY LYFLSLILSTIYLIVVSSTTFGFLQEQYKMGYIDGTDLRHHLRTDSTINALNLSFNTVLYLSMVQVAMLLFSRKREKRMV FWIGISLTVVAQTIWGMSVFHHELLESALPAFAYLFQIAITLMFLACVCYYGITHRRSTLDPCVAPLTFLTLMATTGSIV LFIFDLADFWITEWSDSVSWISTVLSFVTVWEWYERTELLERHREKNGILGRQIFEDEARFGPDSIVTKTSYTDDKHKDD DDSKGHGDNDGNVIIDSQNVHRDSGTTAHSSDQSGNDDLFSPNPAESQHVSFARNSRNEVHHNNHSTGNNNNTSETQTDP QTVFISQQRSNLLDSPFDEEGATRFQKFYHKALDPFISFSDFLINLGLAVSRPLSTASQVSVENSANITNNNTNTSANDE ENTANMVPSSVATGPQTQTQQLQTHSPTPPSVTDVCNQNNSDPLFSTDDLSEGQRHQQLLIIQKQHQKQLLKLSRQHHRQ QLYRQHVQQQQQNSQYNGDPVVTTTTEPFVIDPNFDRSFSSSHHIDPVDPMLQKFVHTRRTNRKQPETNNDRSPPQSPNN E
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.