Protein
MCA_03980_1
Length
628 amino acids
Gene name: NUP42
Description: FG-nucleoporin NUP42
Browser: contigC:1687743-1689630+
RNA-seq: read pairs 1325, FPKM 26.0, percentile rank 48.7% (100% = highest expression)
Protein function
| Annotation: | NUP42 | FG-nucleoporin NUP42 | |
|---|---|---|---|
| KEGG: | K18716 | NUP42 | nucleoporin NUP42 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01658_1 | 49.26% | 203 | 3e-49 | MIA_01658_1 |
| A0A0J9XJK2_GEOCN | 39.85% | 133 | 1e-30 | Similar to Saccharomyces cerevisiae YDR192C NUP42 FG-nucleoporin component of central core of the nuclear pore complex (NPC) OS=Geotrichum candidum GN=BN980_GECA24s00065g PE=4 SV=1 |
| UniRef50_A0A0J9XJK2 | 39.85% | 133 | 2e-27 | Similar to Saccharomyces cerevisiae YDR192C NUP42 FG-nucleoporin component of central core of the nuclear pore complex (NPC) n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XJK2_GEOCN |
| A0A1E3PNP7_9ASCO | 37.24% | 145 | 4e-23 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_64224 PE=4 SV=1 |
| A0A167CFQ1_9ASCO | 35.34% | 133 | 6e-16 | FG-nucleoporin NUP42 OS=Sugiyamaella lignohabitans GN=NUP42 PE=4 SV=1 |
| A0A060TBV7_BLAAD | 34.13% | 126 | 4e-14 | ARAD1B11682p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B11682g PE=4 SV=1 |
| A0A1E4TCP5_9ASCO | 28.68% | 129 | 2e-10 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_32750 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.7854
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
628
Detailed signature matches
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)
Protein sequence
>MCA_03980_1 MAKKNIICKFYQQGRCAKGNNCNFLHPGANSQTSEEELSSTEKLIITYLKTERPLWPLSSFNPITETKKNLICDRDISPE EDRWAYYQAVQNNTLQLYEQNLNSQVQSQKEIEDFILNNTLQAARYAQKAKEIEPQMAFGNINNNSTGGGWGNSSNSFGT SAFGSNSSTNSTPAFGNSTFGSNTSANKAPAFGNSGFGTSGLGSSSTTTGGFSNFASGGNKNSTGAFSSFANSSNTTNNQ SPFSSTTSNSGFGSTQNTSNSTSTPSSGFGQSGFGQTAFGQSGFAKPATTTSATSTFSAPKASVFSSFSNANPFSSASKD SSGTSNPFSFSNSSGTKNTLSFANPSNNNTSAFGNTANKPNTIFGGSNNSNNSSFGSTTDKPATIFGGSNNNNNKPAFAS LNTTSSLSGASNTANISPFGSASTNNNSPFGNATNTTTSTQPTFGNSNNNSTSSFGFGNPTTGNNNNGSSLFGNSTQKNS VSTFSSTAGKDSSTTASPFGAATTGSTQSPFGNATNTNTTTSTFNTGDNSNNRPFSFDSKNSAPPPFNFPSSNSTSSPFG QSNLENPFSKLSTGGSAFGSTKKSFIQGANPEQAKSLNELTEDVRKAFESPEFTIGKVPEIVPPIDVR
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0046872 metal ion binding
Cellular Component
None predicted.