Protein
MCA_03964_1
Length
326 amino acids
Description: protein with SMAD/FHA domain; smad nuclear-interacting protein 1 (SNIP1)
Browser: contigC:1635315-1636296-
RNA-seq: read pairs 320, FPKM 12.1, percentile rank 29.3% (100% = highest expression)
Protein function
| Annotation: | protein with SMAD/FHA domain; smad nuclear-interacting protein 1 (SNIP1) | ||
|---|---|---|---|
| KEGG: | K13108 | SNIP1 | smad nuclear-interacting protein 1 |
| EGGNOG: | 0PGZE | FG06988.1 | FHA domain protein SNIP1 |
| SGD closest match: | S000004006 | PML1 | Pre-mRNA leakage protein 1 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_00061_1 | 47.15% | 193 | 3e-46 | MIA_00061_1 |
| A0A0J9XEA8_GEOCN | 39.42% | 208 | 2e-34 | Similar to Saccharomyces cerevisiae YLR016C PML1 Subunit of the RES complex OS=Geotrichum candidum GN=BN980_GECA11s03662g PE=4 SV=1 |
| UniRef50_A0A0J9XEA8 | 39.42% | 208 | 3e-31 | Similar to Saccharomyces cerevisiae YLR016C PML1 Subunit of the RES complex n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XEA8_GEOCN |
| A0A161HL10_9ASCO | 35.45% | 189 | 7e-26 | Pml1p OS=Sugiyamaella lignohabitans GN=PML1 PE=4 SV=1 |
| A0A1E3PMV3_9ASCO | 34.74% | 190 | 9e-25 | SMAD/FHA domain-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_41163 PE=4 SV=1 |
| A0A060T815_BLAAD | 33.87% | 186 | 3e-17 | ARAD1D06996p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D06996g PE=4 SV=1 |
| Q6C9Y5_YARLI | 28.39% | 155 | 2e-13 | YALI0D07348p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D07348g PE=4 SV=1 |
| PML1_YEAST | 33.00% | 100 | 2e-08 | Pre-mRNA leakage protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PML1 PE=1 SV=1 |
| A0A1E4TG32_9ASCO | 26.85% | 108 | 6e-09 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_2397 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0550
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
300
326
Detailed signature matches
-
-
SSF49879 (SMAD/FHA ...)
-
no IPR
Unintegrated signatures
-
-
cd00060 (FHA)
-
mobidb-lite (disord...)
Residue annotation
-
phosphopeptide bin...
Protein sequence
>MCA_03964_1 MADSYHRRRDSRDYSDDEYSKRHDNDRSRRDYSDDEYRNSRRDDRRRRHGSRRDQDMRNDSYRSNNKYEKQDDYHSKSRR EKDSSYRSRHSRRDDDYYSPDNDKSQSYKRRDKRNEADEARDHHRDYSQSPEPIEKPNYNLSGLLALESNRIYVAENIKS TTPSKPISSVILKYHEPKDRSTKPPKSPRYVLVKFPASSSSSKSSSSSREITIPLDKQTSYLIGTDSRIAQIVLKDETDP DNSEKSPPTDFAADQHAVIQFRQKTKRNKYGELETKNLPYLIDLETEAGTFLNSEQIPEAVYVELRHKDIIQFGKCKDEY ILLKDD
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.