Protein
MCA_03963_1
Length
903 amino acids
Gene name: VPS53
Description: Vacuolar protein sorting-associated protein 53
Browser: contigC:1632454-1635166+
RNA-seq: read pairs 537, FPKM 7.3, percentile rank 21.2% (100% = highest expression)
Protein function
| Annotation: | VPS53 | Vacuolar protein sorting-associated protein 53 | |
|---|---|---|---|
| KEGG: | K20299 | VPS53 | vacuolar protein sorting-associated protein 53 |
| EGGNOG: | 0PGSP | VPS53 | GARP complex subunit Vps53 |
| SGD closest match: | S000003566 | VPS53 | Vacuolar protein sorting-associated protein 53 |
| CGD closest match: | CAL0000194290 | VPS53 | Vps53p |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_00060_1 | 66.08% | 737 | 0.0 | MIA_00060_1 |
| A0A0J9XJP9_GEOCN | 55.13% | 751 | 0.0 | Similar to Saccharomyces cerevisiae YJL029C VPS53 Component of the GARP (Golgi-associated retrograde protein) complex OS=Geotrichum candidum GN=BN980_GECA25s00769g PE=4 SV=1 |
| A0A060TDI3_BLAAD | 49.21% | 756 | 0.0 | ARAD1D07018p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D07018g PE=4 SV=1 |
| UniRef50_A0A060TDI3 | 49.21% | 756 | 0.0 | ARAD1D07018p n=2 Tax=Saccharomycetales TaxID=4892 RepID=A0A060TDI3_BLAAD |
| A0A1E3PM64_9ASCO | 48.77% | 775 | 0.0 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_82314 PE=4 SV=1 |
| A0A167EBN4_9ASCO | 46.21% | 844 | 0.0 | Vps53p OS=Sugiyamaella lignohabitans GN=VPS53 PE=4 SV=1 |
| Q6C9H4_YARLI | 42.41% | 738 | 0.0 | YALI0D11198p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D11198g PE=4 SV=1 |
| A0A1E4THS2_9ASCO | 38.31% | 744 | 7e-165 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_3021 PE=4 SV=1 |
| Q5AB78_CANAL | 29.79% | 715 | 9e-95 | Vps53p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=VPS53 PE=4 SV=1 |
| VPS53_YEAST | 29.58% | 568 | 1e-67 | Vacuolar protein sorting-associated protein 53 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VPS53 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0042
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
600
700
800
903
Detailed signature matches
-
-
PF04100 (Vps53_N)
-
no IPR
Unintegrated signatures
-
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_03963_1 MEALDNEDYDPVVHLQLLFSTPSNLSRLPDIVAGVKTHHNTLNREIDRANKQTKDYQNEDYYQRIQEGNTQLENLYSEID DLREESKETEAKISEMTSHIISLDKTKSNLIYSITVLKRLQMLTTAYEQLSTLVKNKHYREMAQTLPAVQELMSHFKPFR SIPEVATLNQQISKIQVKITDQIFSDFEAMLSGKGDSDLASNLADATLVLDCLDDENSNFSGGHSSKKKLINWYCSTQLR QYRTIFNIADEAGSLENISKRYAFFKRLLKEHVENYAKFFNPSWHMAEELANAFCNYTCDDIKTLLAQGGKNINVQLLLK ALQDTLEFEQYMEKRFASVSNSIPSKKDANSSSLESGKAISMAFQPHLNIWIDHQDRQLSLKFAQYKAPPAPSSDGANDN PEPTVLPSSADLFIFYRQILAQTAKLSTGEPLYNLSKLFAKWLDTFCNQILRPTFPARLNEEDDYKTLALVVATADYCFN TTGQLEEKLQSTVDEQYKDQITFDREKGIFLEIVNTGIKMLVSRVESVLEYSWREMVNTNWAKLDSVGDQSSYVSELNKN LLAETEHVLKYTSKKTYSRLVCDKIVESVANSFLLCISKCRPISEVASEQMLLDMYVIKNTLLKLPSLAPGVDPSTPPST LYVKHVNGGSSIGRVETILKVILTQANPPEGLVQNYFYLIGDKSVTNFKKILEFKGITSRSEQSRFLELFNAHMKAHDKL VEESPILQPLKLTGAGGASLTNSTSNGPNLNSTTNGSSAKSGISIFTNISNTGNNIINNSSLNSNGGLRSISGSSLTFGL GSSISRDNTKSPTSFFSTNNSSRASTDGRTSNDPSFSLSPQGIHIPKFDTPKGLSMAKDQIERSIEKLSLGDGPSVSKFN ENIKNFGRLFRRDTGANNTNQNR
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.