Protein
MCA_03917_1
Length
680 amino acids
Description: Ribonuclease III
Browser: contigC:1490684-1492779-
RNA-seq: read pairs 619, FPKM 11.2, percentile rank 27.9% (100% = highest expression)
Protein function
| Annotation: | Ribonuclease III | ||
|---|---|---|---|
| EGGNOG: | 0PN1S | FG05201.1 | ribonuclease |
| SGD closest match: | S000004852 | RNT1 | Ribonuclease 3 |
| CGD closest match: | CAL0000189883 | DCR1 | Ribonuclease III |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01269_1 | 34.71% | 628 | 4e-99 | MIA_01269_1 |
| A0A0J9XHP0_GEOCN | 45.18% | 197 | 1e-48 | Similar to Saccharomyces cerevisiae YMR239C RNT1 RNAase III, involved in rDNA transcription and rRNA processing OS=Geotrichum candidum GN=BN980_GECA17s02298g PE=4 SV=1 |
| UniRef50_A0A0J9XHP0 | 45.18% | 197 | 3e-45 | Similar to Saccharomyces cerevisiae YMR239C RNT1 RNAase III, involved in rDNA transcription and rRNA processing n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XHP0_GEOCN |
| A0A1E3PDJ5_9ASCO | 27.45% | 510 | 1e-33 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_84136 PE=3 SV=1 |
| A0A060TAW0_BLAAD | 30.00% | 380 | 8e-33 | ARAD1D23298p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D23298g PE=3 SV=1 |
| A0A161HHL3_9ASCO | 31.30% | 361 | 1e-28 | Rnt1p OS=Sugiyamaella lignohabitans GN=RNT1 PE=3 SV=1 |
| RNT1_YEAST | 34.83% | 201 | 4e-27 | Ribonuclease 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RNT1 PE=1 SV=1 |
| A0A1D8PM62_CANAL | 36.36% | 165 | 3e-22 | Ribonuclease III OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DCR1 PE=3 SV=1 |
| A0A1E4THB5_9ASCO | 35.37% | 164 | 1e-20 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_17112 PE=4 SV=1 |
| Q6CC90_YARLI | 28.88% | 232 | 1e-18 | YALI0C11429p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C11429g PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.2993
Predicted cleavage: 17
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
600
680
Detailed signature matches
no IPR
Unintegrated signatures
-
-
SSF54768 (dsRNA-bin...)
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cd00048 (DSRM)
-
mobidb-lite (disord...)
Residue annotation
-
active site cd00593
-
dimerization inter...
-
metal binding site...
-
dsRNA binding site...
Protein sequence
>MCA_03917_1 MSLNQSSPSFRNGKRPHSDDGNSKPSKKNKPNSEDLLFSQIETVEHAVSSLFRAFTLIMENVPRVDNYENNPSLNLRLNS KKVLFAKYLLQEKEKNHLPIFNELVSIMDPKISSTDFVASASSDVESSSSFDDFYSEKLENYMSKQNDEPEESINPANAK FWPPPLPSIPDVNLRHQVFTHKSVGTLYSTSDPKREIEVHNERLEFLGDSIANSLLAIISYENLPTVDEGDLTRCRRQLI SNNTFAEWSKLYGLDKKLMINDKYVSYNRYVVGGRNSGAGTPKFVADTFEAYVGGLWVYYANKHGVGKAFEMVKPWLEQL AQPFFEAIYASGKAKRPAKKQFKIDTSSKKGFNPENPIQIFDDENVDETTEKIVVIDDETSDEKAYTNSLKLPDEIKTQD IPKPKDASNKVDNTNSLPNVSNVADPFATGLYISDKSTEKKQETAKRDLYSKIGIARSHPVYKVIRTEPSGEFTVACIME GETIGVGTARTIKAAGNMAAFQALNNADIILKYASKRRVYYLERDEHDKIKKPITDEPEGLNNSTNTTSETKDRDLSHST QSESKSDKSAGDSASLVVTGDKTPTPKEADIVKPDPSLTAEMIDKFKESPLQSLITVIGPKLASKIKYDFQTEGSVWHCT LSIDSHKFCKSTGSSKKSSKKKAALATLVNCYSQIKDLNQ
GO term prediction
Biological Process
GO:0006396 RNA processing
Molecular Function
GO:0004525 ribonuclease III activity
Cellular Component
None predicted.