Protein
MCA_03878_1
Length
1,015 amino acids
Gene name: STB3
Description: Protein STB3
Browser: contigC:1380899-1383947+
RNA-seq: read pairs 3466, FPKM 42.2, percentile rank 61.5% (100% = highest expression)
Protein function
| Annotation: | STB3 | Protein STB3 | |
|---|---|---|---|
| EGGNOG: | 0PK59 | STB3 | Putative Sin3 binding protein |
| SGD closest match: | S000002576 | STB3 | Protein STB3 |
| CGD closest match: | CAL0000192161 | STB3 | Stb3p |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_02809_1 | 59.44% | 180 | 6e-42 | MIA_02809_1 |
| A0A0J9X896_GEOCN | 60.38% | 159 | 3e-38 | Similar to Saccharomyces cerevisiae YDR169C STB3 Ribosomal RNA processing element (RRPE)-binding protein OS=Geotrichum candidum GN=BN980_GECA05s00730g PE=4 SV=1 |
| UniRef50_A0A0J9X896 | 60.38% | 159 | 5e-35 | Similar to Saccharomyces cerevisiae YDR169C STB3 Ribosomal RNA processing element (RRPE)-binding protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X896_GEOCN |
| A0A167DJ65_9ASCO | 54.82% | 166 | 6e-37 | Stb3p OS=Sugiyamaella lignohabitans GN=STB3 PE=4 SV=1 |
| Q6CCH9_YARLI | 50.00% | 174 | 6e-35 | YALI0C09232p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C09232g PE=4 SV=2 |
| A0A060SYJ6_BLAAD | 68.82% | 93 | 3e-29 | ARAD1C01760p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C01760g PE=4 SV=1 |
| Q59SE2_CANAL | 59.09% | 88 | 7e-27 | Stb3p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=STB3 PE=4 SV=1 |
| A0A1E3PFK2_9ASCO | 53.40% | 103 | 2e-22 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_44033 PE=4 SV=1 |
| STB3_YEAST | 52.27% | 88 | 9e-21 | Protein STB3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=STB3 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1077
Predicted cleavage: 68
Protein family membership
- Sin3 binding protein (IPR018818)
Domains and repeats
None predicted.
Detailed signature matches
-
-
PF10330 (Stb3)
-
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)
Protein sequence
>MCA_03878_1 MSTNSPPPPSNSTNSSSVAGSSGTFSPNRFDSRHNSNSTLPSFSPGNTSSSSLSSSPPTLPSSYSRPKPGSLSTLLAATS TKNPNATSNSAVHQLQQNSQSELFHSSSSSRQQQQSSPTTLTASSHHIHASQSLKPISQLNSSDEIVKQKLLPSFSNSHS ESVNNNNNTLSIPINNNNNNLTHRRYSSNSSPSNKPLSILSKPIQSSSRHSFSSTSSSPLRSESININQHPNNNNNNNNM DSSSSPSNTPPNSSSISATLNSRSPPLNSNGPLNTNSPLALAAAAAVTPEKLANLLTSQGPLPIRHITSHLAVTIKGFGD LSLSKQRRLIIAALDSVDPVNNIRFDKVGWGRWAARKINSPATASSIMSNNGSPTPNISSTSNNNNDTGGVVTNTKISTS ARKRRESLTASQASASSGHNIRPPLSPLLKPTTDNTYYSSSSNSTSYASSPLPSSVLPSTSSLRAKLDDLDDAQRHRGGN ISSPASTTNLPSAATVNAAMTLLNHHNPNSSARAGHGRSHSYSATSSSSSSNNSGPVLTSGFFRNHSKNLTKNRRRRRSS VHRTKMMFRDQEYSDDDDDDDDDISDNEHAIEDDDDDDEEEEDETLNRRNRRNQQPPKLMEEEDDDDDDSEVDENEEEFK ARIRRTSRPSFHRQNDDVMDAEYGDNNNNNNNNNNEDAIIDDSEDSPLDLDHDELDDQVAGNLELDDGHDSAMTGVRTRN YYNSRRSQRSSRNGNNNHSPKSSSALSAAGGSRSAAARRRQSETDEEDWQSMGAASLRRKSTTTNKNVNTTTFANNNNII SDENNNYRYNTDLFSPSSAPTTAAGSFPNPSNFYNTRTNFNSPTSSSSFLQSHRRSSSNGSSAFSNIVLPSLTFDRKPED SKLTGSPGNLSSWSPTVSSMRTPLSAVSRSGNNPSSSSSLTKGIQFKNEPYSSPTGSNSNFKPMNGGLKQGERLPAISDV MRMSNSSTTIINNNNNNNSSSGSSSSGFGKNDGKLNLGNKEEDAVAALVQLRTVG
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.