Protein
MCA_03848_1
Length
700 amino acids
Gene name: RSC9
Description: Chromatin structure-remodeling complex subunit RSC9
Browser: contigC:1285712-1287815-
RNA-seq: read pairs 1947, FPKM 34.3, percentile rank 56.5% (100% = highest expression)
Protein function
| Annotation: | RSC9 | Chromatin structure-remodeling complex subunit RSC9 | |
|---|---|---|---|
| KEGG: | K11763 | RSC9 | chromatin structure-remodeling complex subunit RSC9 |
| EGGNOG: | 0PM7M | RSC9 | complex subunit (Rsc9) |
| SGD closest match: | S000004596 | RSC9 | Chromatin structure-remodeling complex subunit RSC9 |
| CGD closest match: | CAL0000183791 | orf19.2473 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_06159_1 | 47.78% | 586 | 1e-169 | MIA_06159_1 |
| A0A0J9YHH7_GEOCN | 39.09% | 596 | 2e-111 | Similar to Saccharomyces cerevisiae YML127W RSC9 Component of the RSC chromatin remodeling complex OS=Geotrichum candidum GN=BN980_GECA01s04619g PE=4 SV=1 |
| UniRef50_A0A0J9YHH7 | 39.09% | 596 | 3e-108 | Similar to Saccharomyces cerevisiae YML127W RSC9 Component of the RSC chromatin remodeling complex n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9YHH7_GEOCN |
| A0A060TEK3_BLAAD | 36.62% | 568 | 3e-104 | ARAD1D15752p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D15752g PE=4 SV=1 |
| A0A167E6I3_9ASCO | 41.21% | 461 | 2e-86 | Rsc9p OS=Sugiyamaella lignohabitans GN=RSC9 PE=4 SV=1 |
| A0A1E3PS74_9ASCO | 35.30% | 575 | 4e-77 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_48919 PE=4 SV=1 |
| Q6BZY2_YARLI | 33.95% | 598 | 6e-76 | YALI0F29997p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F29997g PE=4 SV=1 |
| RSC9_YEAST | 32.40% | 463 | 3e-48 | Chromatin structure-remodeling complex subunit RSC9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RSC9 PE=1 SV=1 |
| A0A1E4TA58_9ASCO | 29.28% | 526 | 2e-47 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_45105 PE=4 SV=1 |
| Q5AA11_CANAL | 27.80% | 536 | 1e-29 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.2473 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.6653
Predicted cleavage: 74
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
1
100
200
300
400
500
600
700
700
Detailed signature matches
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)
Protein sequence
>MCA_03848_1 MYGQEHTLRTRSSPRIASQYNQQTMPSSMGNPYNQNQALNGNSAIQHQQQPKPMQQYQPQQQHQGISRPQSRFPPNQVQQ QPPFQQQQQQQQQQQQQQPQSLPPSMRVQNVTPMPIMTPSNSPHAFQSPYYQPHLAKAQFPKVQVTTAFGAGVVGSTGIH RIIMSLKSGLESDEKWALKALVEASNLQPEACNLKVNRGIADGLLDVIKSQQTEKSEKDGKKSFIFDPIFPFDKSTLSKE ALKLQQRSLNALLILRNLAMEQDNAQVLSTLPLCKEVISYGLDINNPGVNDEYLHYCIEILESCSFYFICPPFEDPLFQS VISLIQTSIDRSVLLASIRTLSRFLIRDELNISKNFDLQFISQILRNLLSLDYELIAASLDFLYQYTAHPSNISKLVSDA TNTSAVRRHLIRLLTFGMKAPEVDYIKLPFEPTKKIPKSPPTLSQEILNELLQLEEPMRATQWIRCCYEGNLNGEVTQIS LWKAYESQFEPYARMSRSGTGTPTTPNATLNSSGGNSTANPSSNSNQSSGTSTPIPGAGIKLLPAVDFIKNVTAAFQSSS AMVVNLPDGQKRFIIKGIQPREYAIAPSLLKAIAEENEEKLKRQHGRAGQVVNVHGNKNIQPTALQTPYTNPPVFGATVA LVLQNIARSHEGKTLLAPVRKDLIKAATMNTLISEYVGDLLTLLETDEDEDGDDNEDNKS
GO term prediction
Biological Process
GO:0006355 regulation of transcription, DNA-templated
Molecular Function
GO:0003677 DNA binding
GO:0005488 binding
Cellular Component
None predicted.