Protein

MCA_03817_1

Length
476 amino acids

Gene name: SEC61B

Description: Protein transport protein SEC61 subunit alpha

Browser: contigC:1166656-1168238+

RNA-seq: read pairs 5855, FPKM 151.7, percentile rank 85.0% (100% = highest expression)

Protein function

Annotation:SEC61BProtein transport protein SEC61 subunit alpha
KEGG:K10956SEC61A protein transport protein SEC61 subunit alpha
EGGNOG:0PFE7SEC61protein transport protein sec61
SGD closest match:S000004370SEC61Protein transport protein SEC61
CGD closest match:CAL0000178942SEC61Protein transport protein SEC61 subunit alpha

Protein alignments

%idAln lengthE-value
MIA_02823_190.38%4680.0MIA_02823_1
A0A0J9X6C7_GEOCN85.32%4700.0Similar to Saccharomyces cerevisiae YLR378C SEC61 Essential subunit of Sec61 complex (Sec61p, Sbh1p, and Sss1p) OS=Geotrichum candidum GN=BN980_GECA03s00395g PE=3 SV=1
A0A1E3PLJ1_9ASCO80.86%4650.0Essential subunit of Sec61 complex OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_45798 PE=3 SV=1
A0A060T4Z8_BLAAD81.33%4660.0ARAD1B03894p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B03894g PE=3 SV=1
SC61A_YARLI78.06%4650.0Protein transport protein SEC61 subunit alpha OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SEC61 PE=3 SV=2
SC61A_CANAL73.11%4760.0Protein transport protein SEC61 subunit alpha OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SEC61 PE=3 SV=2
UniRef50_A0A1F7ZK4273.25%4710.0Transport protein SEC61 subunit alpha n=1 Tax=Aspergillus bombycis TaxID=109264 RepID=A0A1F7ZK42_9EURO
A0A167DYP3_9ASCO80.09%4320.0Translocon subunit SEC61 OS=Sugiyamaella lignohabitans GN=SEC61 PE=3 SV=1
A0A1E4TGU4_9ASCO69.89%4650.0Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_31757 PE=3 SV=1
SC61A_YEAST71.09%4670.0Protein transport protein SEC61 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC61 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0452

Protein family membership

Domains and repeats

  1. Domain
  2. Domain
1 50 100 150 200 250 300 350 400 450 476

Detailed signature matches

  1. Family IPR002208
    SecY/SEC61-alpha family
    1. PF00344 (SecY)
    2. TIGR00967
    3. PIRSF004557 (SecY_S...)
  2. Domain IPR023201
    SecY subunit domain
    1. SSF103491 (Preprote...)
  3. Domain IPR019561
    Translocon Sec61/SecY, plug domain
    1. PF10559 (Plug_trans...)
  4. SITE IPR030659
    SecY conserved site
    1. PS00756 (SECY_2)
    2. PS00755 (SECY_1)
Unintegrated signatures no IPR
Unintegrated signatures
  1. CYTOPLASMIC_D... (C...)
  2. G3DSA:1.10.33...
  3. NON_CYTOPLASM... (N...)
  4. TMhelix
  5. TRANSMEMBRANE (Tran...)

Protein sequence

>MCA_03817_1
MSTVRFLDLVKPFTPFLPEVAAPERKVPFNQKLIWTGVTLLIFLVMSEIPLYGIVSSDSSDPLFWLRMMLASNRGTLMEL
GITPIVTSSMVFQLLVGTHILEVNMESKSDRELFQTAQKLLAIIISLGQATVYVATGMYGPPSELGFGVCFLLVLQLVFA
GLVAILLDELLQKGYGLGSGISLFVATNICESITWKAFAPTIVNSGRGYEFEGAVVAMFHLLATRKDKKRALIEAFFRTN
LPNMSQVFTTIIMFLVVVYLQGFRVDIPVKSTKARGPQGSFPVRLFYTSNTPIMLQSALTSNIFIISQMLYNKFSDNFFI
RLLGTWEARPGSSQLFASSGIAYYMQPPTNLTEAFLDPIKTVVYVAFVLGFCALFSTTWIEISGTSPRDVAKQFKDQGIV
IAGRRETSVYKELKKIIPTAAALGGATIGLLSVGSDLLGTLGSGTGILLAVTTIYGYIETATREGGGNLEALKMFA

GO term prediction

Biological Process

GO:0015031 protein transport

Molecular Function

None predicted.

Cellular Component

GO:0016020 membrane