Protein

MCA_03805_1

Length
547 amino acids

Gene name: SEN54

Description: tRNA-splicing endonuclease subunit SEN54

Browser: contigC:1138187-1139913-

RNA-seq: read pairs 1250, FPKM 28.2, percentile rank 50.8% (100% = highest expression)

Protein function

Annotation:SEN54tRNA-splicing endonuclease subunit SEN54
KEGG:K15326TSEN54 tRNA-splicing endonuclease subunit Sen54
EGGNOG:0PNWXSEN54TRNA splicing endonuclease subunit
SGD closest match:S000006004SEN54tRNA-splicing endonuclease subunit SEN54
CGD closest match:CAL0000194308orf19.7361tRNA splicing endonuclease subunit

Protein alignments

%idAln lengthE-value
MIA_05249_139.73%5118e-103MIA_05249_1
A0A0J9XI95_GEOCN33.85%5203e-62Similar to Saccharomyces cerevisiae YPL083C SEN54 Subunit of the tRNA splicing endonuclease OS=Geotrichum candidum GN=BN980_GECA16s01308g PE=4 SV=1
UniRef50_A0A0J9XI9533.85%5206e-59Similar to Saccharomyces cerevisiae YPL083C SEN54 Subunit of the tRNA splicing endonuclease n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XI95_GEOCN
A0A1E3PPH2_9ASCO29.13%5151e-48Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_50725 PE=4 SV=1
A0A167FJ13_9ASCO34.62%2607e-33Sen54p OS=Sugiyamaella lignohabitans GN=SEN54 PE=4 SV=1
A0A060T7V1_BLAAD41.63%2092e-32ARAD1C30800p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C30800g PE=4 SV=1
Q6CGL6_YARLI49.15%1185e-22YALI0A18293p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A18293g PE=4 SV=1
A0A1E4TI33_9ASCO35.60%1913e-19Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_3096 PE=4 SV=1
SEN54_YEAST40.38%1042e-11tRNA-splicing endonuclease subunit SEN54 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEN54 PE=1 SV=1
A0A1D8PKA3_CANAL33.71%896e-10tRNA splicing endonuclease subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.7361 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0974

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 50 100 150 200 250 300 350 400 450 500 547

Detailed signature matches

  1. Domain IPR024336
    tRNA-splicing endonuclease, subunit Sen54, N-terminal
    1. PF12928 (tRNA_int_e...)
Unintegrated signatures no IPR
Unintegrated signatures
  1. mobidb-lite (disord...)

Protein sequence

>MCA_03805_1
MDDDVHLEDEVVDWRFISSVNSSGSIPRRGVKDFEPDGTNLQTNTLQESRLAMYDALMVPRGHSGKYHVTAKWYPDLRRA
RVDPPARGIHFQTIGTSDSNGDVWLEYEELLYLVERGSLECFSLTSPNINSQDENNINDDDDKKPALNSKASSVNATPMS
LQAVYAAVFSDESLYLTSKSMANAHTPSSFHVKNHSELERYQVYANLKKNGYIVRRSKYFNDGQIEESPKKIEKIHKSSD
SAFPTIFTNPLSLFNSNSPLNPASIVSDLRLLFKDFFEQFKQFFNPYISAFKNYLNASPTYLKISHIVSGYYSAVTTKIL
STYARITSSRGKNIPRSYGAIFDSLDFIPSNIPPISKLEKIKLDNVAEENMEPLAPYRPIFNVWKPTNNFRKSDPGEPDF
FVAVINSGEYRTPTRLELMKLLNAVGVKGDARYRPNNNKKKKQEDQKDKNAKGNTKPAQTESALSSNSEVFNSSDYTIPN
KMRMLKYGFRQVQLAVVDSGIINYTTVTDAPFGRVKIYFQPPKSNKDSIFSSFYSTISSFFTSPMSK

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.