MCA_03797_1

Browser: contigC:1119455-1120535+

RNA-seq: read pairs 74, FPKM 2.5, percentile rank 12.9% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0045

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. NON_CYTOPLASM... (N...)
   22 - 359

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
2. PR01217 (PRICHEXTENSN)
   130 - 147

   PRINTS
   PR01217 (PRICHEXTENSN)

   150 - 175

   PRINTS
   PR01217 (PRICHEXTENSN)

   92 - 113

   PRINTS
   PR01217 (PRICHEXTENSN)

   113 - 129

   PRINTS
   PR01217 (PRICHEXTENSN)
3. SIGNAL_PEPTIDE (Sig...)
   1 - 21

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
4. SIGNAL_PEPTID... (S...)
   17 - 21

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
5. SIGNAL_PEPTID... (S...)
   5 - 16

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
6. SIGNAL_PEPTID... (S...)
   1 - 4

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
7. SignalP-noTM
   1 - 21

   SignalP euk
   SignalP-noTM (SignalP-noTM)
8. mobidb-lite (disord...)
   79 - 333

   MobiDB Lite
   mobidb-lite (disorder_prediction)

Protein sequence

>MCA_03797_1
MIIKTFLLLVPLIELFSGVSASTEAQLIKKQKDKESATVLDYNELYKNSYSSNPLYQKLFLEFTKKTGLYIREAVAQAPG
DGTAPVEPGTGDPAQPDPNVPTPDPNVPTPDPNVPTPDPNVPTPDPNVPTPDPNIPTPDPNVPTPDPNIPTPDPNIPTPD
PNIPTPDPNIPTPDPNIPTPDPNTPTPDPNTPTPDPNTPTPDPNTPDPNTPTPNPNDPTSPVEPGTGGPTSPVEPGSGNG
NGGGGGGTEPGSGTGGGSGSDNGNGGGSGGGGGGTGPGSGTGTGSGSGSGSGSGSGSGSNGTNRPPVSTTVRTSQSPAAG
TSRPASGGQGAAETNFANNLQPFYFIAAIPAIVVSLCLV

GO term prediction