Protein

MCA_03787_2

Length
203 amino acids

Gene name: YPT1

Description: GTP-binding protein YPT1

Browser: contigC:1082700-1084506-

RNA-seq: read pairs 10416, FPKM 630.9, percentile rank 95.1% (100% = highest expression)

Protein function

Annotation:YPT1GTP-binding protein YPT1
KEGG:K07874RAB1A Ras-related protein Rab-1A
EGGNOG:0PI28YPT1GTP-binding protein Ypt1
SGD closest match:S000001856YPT1GTP-binding protein YPT1
CGD closest match:CAL0000185241YPT1Rab family GTPase

Protein alignments

%idAln lengthE-value
A0A0J9X8R7_GEOCN87.32%2051e-128Similar to Saccharomyces cerevisiae YFL038C YPT1 Rab family GTPase OS=Geotrichum candidum GN=BN980_GECA05s04300g PE=4 SV=1
A0A167F5G8_9ASCO84.92%1993e-126Rab family GTPase YPT1 OS=Sugiyamaella lignohabitans GN=YPT1 PE=4 SV=1
Q6C9V1_YARLI81.28%2031e-122YALI0D08162p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D08162g PE=4 SV=1
A0A060TEF3_BLAAD85.71%2035e-122ARAD1D14718p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D14718g PE=4 SV=1
A0A1E3PGG7_9ASCO79.80%2038e-119GTP-binding protein YPTC1 OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_71003 PE=4 SV=1
UniRef50_P1162078.43%2049e-113GTP-binding protein ypt1 n=54 Tax=Eukaryota TaxID=2759 RepID=YPT1_SCHPO
A0A1E4TGS8_9ASCO77.07%2052e-106Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_2600 PE=3 SV=1
Q5AI00_CANAL71.50%2071e-106Rab family GTPase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=YPT1 PE=4 SV=1
YPT1_YEAST72.46%2076e-105GTP-binding protein YPT1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPT1 PE=1 SV=2
MIA_03550_188.68%1593e-99MIA_03550_1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0107

Protein family membership

Domains and repeats

  1. Domain
1 20 40 60 80 100 120 140 160 180 203

Detailed signature matches

  1. Family IPR001806
    Small GTPase superfamily
    1. PF00071 (Ras)
  2. Domain IPR027417
    P-loop containing nucleoside triphosphate hydrolase
    1. SSF52540 (P-loop co...)
  3. Domain IPR005225
    Small GTP-binding protein domain
    1. TIGR00231
Unintegrated signatures no IPR
Unintegrated signatures
  1. G3DSA:3.30.70...
  2. G3DSA:3.40.50...
  3. PR00449 (RASTRNSFRMNG)
  4. PS51419 (RAB)
  5. SM00173 (ras_sub_4)
  6. SM00174 (rho_sub_3)
  7. SM00175 (rab_sub_5)
  8. SM00176 (ran_sub_2)
  9. SM00177 (arf_sub_2)
  10. cd01869 (Rab1_Ypt1)

Residue annotation

  1. Rab subfamily moti...
  2. G1 box cd01869
  3. GTP/Mg2+ binding s...
  4. Rab subfamily moti...
  5. Switch I region cd...
  6. putative GEF inter...
  7. G2 box cd01869
  8. Rab family motif 1...
  9. GDI interaction si...
  10. putative effector ...
  11. Rab family motif 2...
  12. G3 box cd01869
  13. Switch II region c...
  14. Rab family motif 3...
  15. Rab family motif 4...
  16. Rab family motif 5...
  17. Rab subfamily moti...
  18. G4 box cd01869
  19. G5 box cd01869
  20. Rab subfamily moti...

Protein sequence

>MCA_03787_2
MNTEYDYLFKLLLIGDSGVGKSCLLLRFAEDNYTESYISTIGVDFKIKTVDLDGKTVKLQIWDTAGQERFRTITSSYYRG
AHGIIVVYDVTEQESFNNVKQWFQEIDRYATEGVNKLLVGNKSDMTDKKVVEYAVAKEFADSMGISFIETSAKQSTNVQD
AFLTMARQIKERLGGSGEGTSNDKSPVNIRGNNVNTGAAGGCC

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003924 GTPase activity
GO:0005525 GTP binding

Cellular Component

None predicted.