MCA_03768_1

Browser: contigC:1023959-1025221+

RNA-seq: read pairs 224, FPKM 7.0, percentile rank 20.5% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0963

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. NON_CYTOPLASM... (N...)
   22 - 396

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
2. SIGNAL_PEPTIDE (Sig...)
   1 - 21

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
3. SIGNAL_PEPTID... (S...)
   17 - 21

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
4. SIGNAL_PEPTID... (S...)
   6 - 16

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
5. SIGNAL_PEPTID... (S...)
   1 - 5

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
6. SignalP-noTM
   1 - 21

   SignalP euk
   SignalP-noTM (SignalP-noTM)

Protein sequence

>MCA_03768_1
MVAKPLFYSLAALLSVQGVFALPIDEDQEVVEISKVEENCLNVCYDAVSKFEDSDACSVNNPESFYNIAQKCLSCICKDL
KYPFPENAELLSGLSKCNLSAPKCVSVIPEEGLSAEELEKRTFFYKKYNYNKCYTVTRYHPKPTPNIKCNKGYHHTTVTI
PHKTHRSSKYRCGNVITYYPPATYPACTVTVPACQTRKTVYVTPTRPGAPPCVSGYESKVTTLPAFTATGSTKTHGDCVT
IYKPVTLPSKVVTIKPCHKRTTVTIYPPKPSQTITCKSGYKPGYVTFSKTTISGTTTTGANGIVTVYKKKVWPEYCVWKP
ACTGRPTVTVTPPRPSYYKTCIPGSNSKTVYVGGKWYPQRTVTGKDNTVTVSIGTKYHGSKTVIPACTTKPRHYNN

GO term prediction