Protein
MCA_03749_1
Length
421 amino acids
Browser: contigC:967486-968949+
RNA-seq: read pairs 1114, FPKM 32.6, percentile rank 55.0% (100% = highest expression)
Protein function
| KEGG: | K12605 | CNOT2 | CCR4-NOT transcription complex subunit 2 |
|---|---|---|---|
| EGGNOG: | 0PJGM | PGUG_02842 | NOT2 family |
| SGD closest match: | S000002324 | CDC36 | General negative regulator of transcription subunit 2 |
| CGD closest match: | CAL0000200147 | orf19.6075 | CCR4-NOT core subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_04521_1 | 39.05% | 402 | 2e-61 | MIA_04521_1 |
| A0A0J9X8X7_GEOCN | 53.14% | 175 | 8e-62 | Similar to Saccharomyces cerevisiae YDL165W CDC36 Component of the CCR4-NOT complex OS=Geotrichum candidum GN=BN980_GECA06s01836g PE=4 SV=1 |
| UniRef50_A0A0J9X8X7 | 53.14% | 175 | 2e-58 | Similar to Saccharomyces cerevisiae YDL165W CDC36 Component of the CCR4-NOT complex n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X8X7_GEOCN |
| A0A060T9G7_BLAAD | 51.41% | 177 | 1e-59 | ARAD1C37840p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C37840g PE=4 SV=1 |
| Q6CDL7_YARLI | 48.04% | 179 | 2e-56 | YALI0B22968p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B22968g PE=4 SV=1 |
| A0A1E3PNK1_9ASCO | 35.20% | 321 | 3e-50 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_49460 PE=4 SV=1 |
| A0A1E4TFV6_9ASCO | 45.88% | 170 | 4e-45 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_19962 PE=4 SV=1 |
| A0A1D8PC71_CANAL | 42.70% | 178 | 2e-41 | CCR4-NOT core subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.6075 PE=4 SV=1 |
| NOT2_YEAST | 33.85% | 195 | 5e-32 | General negative regulator of transcription subunit 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDC36 PE=1 SV=1 |
| A0A167FJU6_9ASCO | 39.80% | 98 | 2e-12 | CCR4-NOT core subunit NOT3 OS=Sugiyamaella lignohabitans GN=NOT3 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0342
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
300
350
421
Detailed signature matches
-
-
PF04153 (NOT2_3_5)
-
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)
Protein sequence
>MCA_03749_1 MVERNQNGKFAHMQSQGNLWGSSNSSNHVQQQQYLSRNSQPQQGSFYASPSANSSPLVNNNAANSAALYTQLTQQQQQQG PLDPRDFPELGAPSGTNYQQMLQQQQTFHNSGLASSQRHNGGSTVVNGNASNRTLLNGPPGLIGTSTANRGARNGNDTDD FPALPSSNTPSTEHASIVGNSNSASQFISRNGSDVKAASVGSKNSTSLHTDIASTGASTNSSHKSAKDTKSNTNSSSAKS PNPIIKPENIDKFGMSGLLSVLKMENNDETAVAIGNDINSLAIISDDKMISTSFTEGWNEDQNQPAARVVPEPIFSVPHC YHIDSSKLEPIKSRIPKLTDDALFYIFYTMPRDVLQEAAAAELQNRNWRFHKLLKLWLTKDPLSEPIPKNNNAEQGTYIF FDPYTWERVKKDLLLFYSAVA
GO term prediction
Biological Process
GO:0006355 regulation of transcription, DNA-templated
Molecular Function
None predicted.
Cellular Component
GO:0005634 nucleus