Protein
MCA_03741_1
Length
320 amino acids
Browser: contigC:946581-947675+
RNA-seq: read pairs 408, FPKM 15.7, percentile rank 35.1% (100% = highest expression)
Protein function
| KEGG: | K12597 | AIR1_2 | protein AIR1/2 |
|---|---|---|---|
| EGGNOG: | 0PIZ3 | PGUG_01757 | zinc knuckle domain protein |
| SGD closest match: | S000002334 | AIR2 | Protein AIR2 |
| CGD closest match: | CAL0000199717 | orf19.4844 | TRAMP complex RNA-binding subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01503_1 | 42.91% | 275 | 6e-57 | MIA_01503_1 |
| A0A0J9XAJ5_GEOCN | 45.76% | 177 | 5e-50 | Similar to Saccharomyces cerevisiae YDL175C AIR2 Zinc knuckle protein, involved in nuclear RNA processing and degredation as a component of the TRAMP complex OS=Geotrichum candidum GN=BN980_GECA06s00571g PE=4 SV=1 |
| UniRef50_A0A0J9XAJ5 | 45.76% | 177 | 1e-46 | Similar to Saccharomyces cerevisiae YDL175C AIR2 Zinc knuckle protein, involved in nuclear RNA processing and degredation as a component of the TRAMP complex n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XAJ5_GEOCN |
| A0A060T7Z0_BLAAD | 46.95% | 164 | 2e-45 | ARAD1B23991p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B23991g PE=4 SV=1 |
| A0A1E3PQS7_9ASCO | 44.38% | 178 | 6e-40 | Uncharacterized protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_14593 PE=4 SV=1 |
| AIR2_YEAST | 36.84% | 209 | 4e-38 | Protein AIR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AIR2 PE=1 SV=1 |
| Q6CGQ4_YARLI | 42.51% | 167 | 1e-37 | YALI0A17292p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A17292g PE=4 SV=1 |
| Q5APC1_CANAL | 38.54% | 192 | 1e-35 | TRAMP complex RNA-binding subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.4844 PE=4 SV=1 |
| A0A167EHL1_9ASCO | 47.92% | 96 | 3e-21 | Air1p OS=Sugiyamaella lignohabitans GN=AIR1 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0022
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
320
Detailed signature matches
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_03741_1 MTTTTNPNEEENEIIIVQPHTETSSLFSKKPIFNDDDFEEDLPKTTHDSDFEELPPSKDDKELLMNITDHSPTNKNSNNS KPDHYQAAPSYEEVRNDNTEDALIIERGEGRYFGMSNGEPEAIICRKCNEEGHKAAECTTIVCEICGVKNDHVTRNCNKS KVCSRCGHLGHLRKDCKETTPNAMYCHFCSSTSHRSSTCAKIWRSYIRKRDRSEHYPERVYCYNCGGEGHYGDDCLEQRR VELKYVEDSAFNGESLPEKCKERYFREISRLRREKERSRRRVVEKTMTRQEKRASIRKFDSRRGNRDDYNYNNNSKNRHF
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
GO:0008270 zinc ion binding
Cellular Component
None predicted.