Protein
MCA_03715_1
Length
923 amino acids
Description: protein similar to SWI/SNF complex subunit SWI3
Browser: contigC:856848-859971+
RNA-seq: read pairs 1970, FPKM 26.3, percentile rank 49.0% (100% = highest expression)
Protein function
| Annotation: | protein similar to SWI/SNF complex subunit SWI3 | ||
|---|---|---|---|
| EGGNOG: | 0PFJS | FG01925.1 | complex subunit |
| SGD closest match: | S000003712 | SWI3 | SWI/SNF complex subunit SWI3 |
| CGD closest match: | CAL0000196990 | orf19.4488 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A0J9XHY3_GEOCN | 42.07% | 656 | 5e-135 | Similar to Saccharomyces cerevisiae YJL176C SWI3 Subunit of the SWI/SNF chromatin remodeling complex OS=Geotrichum candidum GN=BN980_GECA15s02980g PE=4 SV=1 |
| UniRef50_A0A0J9XHY3 | 42.07% | 656 | 9e-132 | Similar to Saccharomyces cerevisiae YJL176C SWI3 Subunit of the SWI/SNF chromatin remodeling complex n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XHY3_GEOCN |
| A0A060TB67_BLAAD | 41.42% | 635 | 9e-125 | ARAD1D32604p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D32604g PE=4 SV=1 |
| A0A167FXI7_9ASCO | 35.31% | 640 | 4e-103 | Swi3p OS=Sugiyamaella lignohabitans GN=SWI3 PE=4 SV=1 |
| Q6C1I6_YARLI | 36.20% | 627 | 1e-102 | YALI0F15939p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F15939g PE=4 SV=1 |
| A0A1E3PRF4_9ASCO | 37.41% | 433 | 2e-75 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_81107 PE=4 SV=1 |
| SWI3_YEAST | 38.16% | 380 | 3e-72 | SWI/SNF complex subunit SWI3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SWI3 PE=1 SV=1 |
| MIA_02767_1 | 40.71% | 420 | 4e-68 | MIA_02767_1 |
| A0A1E4TJH8_9ASCO | 58.13% | 160 | 3e-59 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_12760 PE=4 SV=1 |
| A0A1D8PH73_CANAL | 57.04% | 135 | 7e-49 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.4488 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0015
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
1
100
200
300
400
500
600
700
800
923
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
cd00167 (SANT)
-
mobidb-lite (disord...)
Residue annotation
-
DNA binding site c...
Protein sequence
>MCA_03715_1 MSSDPSASANPTPNENQASEFASTLSTDLKNESTEPKLAVKETSSLETPNTNILPADSSVPSSIPQPESTINTNTAFKAD ETDKLAEKSDATVPESESAPTDSNQLKDSSVSNNTEELTKPDDPMQDVETVIQTSAEENEALENKTVESAPLDSVPLSSS TPKDTREATPKLKENDAPKPSNLKEEMKLANSQPSNLSSTDEKLIVKDESAKKTNEDVEMQDVKPSTFDAPKDSIHISSI PDAAPPLSSLPPPSQQSSTLPPSGLSSNISGSIPAKIDPKDIPPPKHIERKPPAELPVKKLIQTHAIVIPSYASWFSLNH IHEVEKRSLPEFFNKRNRSKTPEYYMKYRNFMVNTYRLAPAEYLTVTACRRHLVGDAAAIMRIHSFLDKWGLINYQVDVE QRPQNVAPPFTGHWKVLHDTPRGLFPFQFYEGVEDPSVNKLPGGKSIDDVKALAAQRGSLNANGVSEHSITSTTTTTTTT VQETKVTTKTAASSPENDVSHSDSLQPIWTPQELLKLLEGVEKFSNDWSKIASHVGSKTKEQAITKFLSLSIEDPYLELN SSNNASEEGRGSAASSALSNGKRSSVDTDSSDRPETKRSKTTDYQSSSDYNWADKLGPLKYGLQNIPLAQAENPVLSVVT FLAGLVDPEVVAAAAGRSVAQIKKQIQREIDESSKSGSSTKEIESKSDESNGNNENQLSNDSKKPSNDSTGDSSMPDVSN NESQANEDNESELNGQASTSKSQEIHNKYPLPFEDAMNIAFGSIAARSSILCTETERKLHMDLFKLLSQQGAKMNIKINQ VNKLEREMETERRELDYEREELFLDRLALTRKIDKVKDLLTKSIQFVESGNTTMMKSMIDDAYKVVQDGTKLAFQNNGNS TEKSAVNNGSLLEAEDLSKATSTPKTVEPVSVEIPQTYKYWTM
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
Cellular Component
None predicted.