Protein

MCA_03586_1

Length
874 amino acids

Gene name: GRR1A

Description: SCF E3 ubiquitin ligase complex F-box protein GRR1

Browser: contigC:414257-416882+

RNA-seq: read pairs 1879, FPKM 26.5, percentile rank 49.3% (100% = highest expression)

Protein function

Annotation:GRR1ASCF E3 ubiquitin ligase complex F-box protein GRR1
KEGG:K03360GRR1 F-box and leucine-rich repeat protein GRR1
EGGNOG:0QEH4GRR1ubiquitin ligase complex F-box protein
SGD closest match:S000003850GRR1SCF E3 ubiquitin ligase complex F-box protein GRR1
CGD closest match:CAL0000180420GRR1SCF ubiquitin ligase complex subunit

Protein alignments

%idAln lengthE-value
MIA_00140_161.89%4880.0MIA_00140_1
A0A0J9XA31_GEOCN53.35%4930.0Similar to Saccharomyces cerevisiae YJR090C GRR1 F-box protein component of the SCF ubiquitin-ligase complex OS=Geotrichum candidum GN=BN980_GECA06s04168g PE=4 SV=1
UniRef50_A0A0J9XA3153.35%4930.0Similar to Saccharomyces cerevisiae YJR090C GRR1 F-box protein component of the SCF ubiquitin-ligase complex n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XA31_GEOCN
Q6CBX1_YARLI48.64%4779e-163YALI0C14740p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C14740g PE=4 SV=1
A0A167FYJ8_9ASCO46.18%5114e-162SCF ubiquitin ligase complex subunit GRR1 OS=Sugiyamaella lignohabitans GN=GRR1 PE=4 SV=1
A0A1E3PP90_9ASCO47.70%4784e-153RNI-like protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_22384 PE=4 SV=1
A0A1D8PP13_CANAL45.99%4745e-142SCF ubiquitin ligase complex subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=GRR1 PE=4 SV=1
A0A060TC04_BLAAD46.17%4052e-120ARAD1B18898p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B18898g PE=4 SV=1
GRR1_YEAST40.85%4704e-108SCF E3 ubiquitin ligase complex F-box protein GRR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GRR1 PE=1 SV=1
A0A1E4TMC6_9ASCO33.62%4704e-82Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_30926 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0242

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
  3. Repeat
  4. Repeat
1 100 200 300 400 500 600 700 800 874

Detailed signature matches

  1. Domain IPR001810
    F-box domain
    1. SSF81383 (F-box domain)
    2. PF12937 (F-box-like)
  2. Domain IPR032675
    Leucine-rich repeat domain, L domain-like
    1. G3DSA:3.80.10.10
  3. Repeat IPR006553
    Leucine-rich repeat, cysteine-containing subtype
    1. SM00367 (LRR_CC_2)
  4. Repeat IPR001611
    Leucine-rich repeat
    1. PF13516 (LRR_6)
Unintegrated signatures no IPR
Unintegrated signatures
  1. G3DSA:1.20.12...
  2. SSF52047 (RNI-like)
  3. mobidb-lite (disord...)

Protein sequence

>MCA_03586_1
MSIPSRGRFLYDVRPVPLEEEPKHDVSKLTNNKDSSTITPYTLLDKTKTPISRLPPELLNHIFKFITERGDLYKTIYVCK
YWFKLTIDALWLRPNLVKDKPLLELSNLLSKPVSSLTVPYHLMIKRLNLSSVTNALTDEILLNFTVCTQLERLTLIGCQE
ITDESLVPFFASCHNILSVDLTNVFKITDKSIISLASNCKKLQGIYATACKELTDDSIVCLAESCPSIKRLKLTSCSNIT
DYSVQKIIQNCTSLVELDLADCNKISDATAAMAFIRLPQLREFRLAFDMNISDSAILSLPPSAFYDKLRLMDLTSCSLIT
DDSIERLISVAPRLRHLVLAKCVNITDLSLNAITKLGRNLHYLHLGHCSNITNRGISSLVKACNRIEYIDVASCTQLTDQ
GVQDLATLPKLRRVGLVKCQNISDNSILSFAHRTGPDNTLERIHLSYCSSITTHSITALVNACDRLTHLSLSGVPAFLKD
EFTRYCRDPPPDFNEHQQRSFCVFSSTGVKGLREQLNKMREIQLQEQSRLEAAGILDRPPNNNNNNVSSVWNSLTRDIAA
FDGQRNASAFTIPERIDLATVPIRFRGMQNQIRQVHNYPLELNTFRSLLTQLIMHVGINEVTALHMATNSVDSIYSAPTI
TIINLNLCLDVFYTCLSMLQYPAFIGIRFTLIISQVMNHTMNLLTTLFASRGVVEPDQVEDIQEQIINNAITFARTNISE
SVLIQQFTALHNMMVQNVAQLQQMTPAVRTQLQQPQQAQIVTDRNDEEGDAVMTEVGNNNNNNNHNNDNGDNNNNNNNNN
DDVMITDGIGLTNNTNQGNGRTGIEGSAWNRTTDGPSGGPVIGLAYPNNGAARRRQSAANGYTDLALSDQPALD

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0005515 protein binding

Cellular Component

None predicted.