Protein

MCA_03535_1

Length
530 amino acids

Description: protein with DDE superfamily endonuclease and DNA-binding HTH (CenpB-type) domains

Browser: contigC:254839-256432-

RNA-seq: read pairs 795, FPKM 18.5, percentile rank 39.3% (100% = highest expression)

Protein function

Annotation:protein with DDE superfamily endonuclease and DNA-binding HTH (CenpB-type) domains
CGD closest match:CAL0000199342orf19.3820Uncharacterized protein

Protein alignments

%idAln lengthE-value
UniRef50_A0A0F7ZJ4423.18%3842e-18Uncharacterized protein n=1 Tax=Hirsutella minnesotensis 3608 TaxID=1043627 RepID=A0A0F7ZJ44_9HYPO
A0A1D8PM59_CANAL25.40%3742e-16Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.3820 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0600

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 50 100 150 200 250 300 350 400 450 500 530

Detailed signature matches

  1. Domain IPR006600
    HTH CenpB-type DNA-binding domain
    1. PS51253 (HTH_CENPB)
  2. Domain IPR004875
    DDE superfamily endonuclease domain
    1. PF03184 (DDE_1)
Unintegrated signatures no IPR
Unintegrated signatures
  1. mobidb-lite (disord...)

Protein sequence

>MCA_03535_1
MSESQTYTADEVYAIFRELNGERNLWSLSKEFKVSHSSLQRRHQKFLKVLEEPDERLTMSPKEENMLFSYIIYLTKKKNP
PSATEIRRIGAKMLEREGMLSSNWFDRFSRNHYDLKTDILINLDFTDDFIRHAGADDEDIKDFFEEYLEIQESYRLDDDH
IFIIDEARFKIGGNATEESVDKTTYIVSEEDGRRVKGSNNESLKSVTVIEAISKSGKVGKPILIHNTTKSMMDKESDSPA
SSEKSKTGSIHEEIFLDWLDSNFANPDDKSCCTLLIMNDSTSYTTKQVYEKLAKLRIIQILIPSQMFKLLHFLNTACFKN
AKTLTRTKIYQDFFGNDNNDDLFPDEPIQNQQATKLFFENYLNSRQNAFSPENIKNVFEITGLNSKDPQIALEKFRSQVP
KIPTTTKNKESNTDNDDSVDTTADLLDNFKPFKKIPIEEAMAAGDQVVYKELVRMNEQLDRLEILRAHLIHVAREKSAQC
FLLTLIEEDMKRENEQLLKECHDEFGSDSDEYSGDDEYNNSQQELKKRKI

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003676 nucleic acid binding

Cellular Component

None predicted.