Protein
MCA_03454_1
Length
744 amino acids
Gene name: TRF5
Description: Poly(A) RNA polymerase protein 1
Browser: contigC:19059-21294+
RNA-seq: read pairs 790, FPKM 13.1, percentile rank 31.1% (100% = highest expression)
Protein function
| Annotation: | TRF5 | Poly(A) RNA polymerase protein 1 | |
|---|---|---|---|
| KEGG: | K03514 | PAPD5_7 | non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] |
| EGGNOG: | 0PJHK | FG08158.1 | Topoisomerase family protein TRF4 |
| SGD closest match: | S000005243 | TRF5 | Poly(A) RNA polymerase protein 1 |
| CGD closest match: | CAL0000193291 | orf19.429 | Non-canonical poly(A) polymerase |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_05025_1 | 53.21% | 530 | 4e-170 | MIA_05025_1 |
| A0A0J9XBA3_GEOCN | 46.11% | 553 | 1e-149 | Similar to Saccharomyces cerevisiae YOL115W PAP2 Non-canonical poly(A) polymerase OS=Geotrichum candidum GN=BN980_GECA06s04795g PE=4 SV=1 |
| UniRef50_A0A0J9XBA3 | 46.11% | 553 | 3e-146 | Similar to Saccharomyces cerevisiae YOL115W PAP2 Non-canonical poly(A) polymerase n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XBA3_GEOCN |
| A0A167EZX7_9ASCO | 56.39% | 360 | 3e-142 | Non-canonical poly(A) polymerase PAP2 OS=Sugiyamaella lignohabitans GN=PAP2 PE=4 SV=1 |
| A0A060TBB9_BLAAD | 55.84% | 351 | 4e-134 | ARAD1D33946p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D33946g PE=4 SV=1 |
| A0A1E3PFV1_9ASCO | 54.52% | 354 | 4e-136 | Nucleotidyltransferase (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_6785 PE=4 SV=1 |
| Q5A2B2_CANAL | 41.38% | 522 | 2e-117 | Non-canonical poly(A) polymerase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.429 PE=4 SV=1 |
| TRF5_YEAST | 48.73% | 355 | 2e-116 | Poly(A) RNA polymerase protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TRF5 PE=1 SV=2 |
| Q6BZV8_YARLI | 46.83% | 363 | 1e-109 | YALI0F30525p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F30525g PE=4 SV=1 |
| A0A1E4TJN8_9ASCO | 38.80% | 299 | 4e-65 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_11312 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.8357
Predicted cleavage: 35
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
600
744
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
SSF81301 (Nucleotid...)
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SSF81631 (PAP/OAS1 ...)
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cd05402 (NT_PAP_TUTase)
-
mobidb-lite (disord...)
Residue annotation
-
putative primer-bi...
-
active site cd05402
-
metal binding tria...
Protein sequence
>MCA_03454_1 MNKSQSNISNRQLKGIQKKEIRKANNQFKHYSRSKTPLGSKHQDSNYNDSENSKSKSKKNKRNKKNKLKTSAKNTPLSEP DSISNNSENSHQSHSEATDSLSPNSINNIDTSKLLNQNNEKPDGSQDTHTLDNNADFIAFDFSEDDQEEEDDDDDGNEEN NNSISNNNLDADDSTYIPSINTLPSSGSLKRKRSDDDYGDEDDTSYTPSLSISESTNGSSHSKSRKRMDRSSQFPWLQNK KGKDHSMEPEVGDWLTAEIFDFVKYLSPSKAEILARNNAVQRMRDLVATMWQDATVHVFGSYATDMYLPGSDIDMVITSP SERLANKTYLYQLGSKLRSPAFSRFASSVQIISKTRVPIIKYVDTESNIHIDLSFERRNGLVAVEQIRTWSKKFPCLRNL VIPIKQFLARRNLNNVHTGGMGGYSVVCMVVSFLSLHPKISAGTIDPMKNLGVLLIEFFELYGRKFNYDNVGLRMRASEI GYIKKKNYPELCASNNGPRNYSGTLSLVIEDPDDPTNNISRGTFNILKIRKAFTGAYDMLRAKCYEMDALSFHYRKGQSI LGSIIKLKGPERDLNDFRSSVKNIAWIPPKPTETTSINSNNSHSKPSNFDVNTIYDSASDSDFEPYHRDSNIKNEPKKSK TPPPKNEKTENSSQIDKTNNSENELSDSEYKPTLRKAQNKTEIITLSDSSESEADIDNNYEPQLPSRPLKKSSSTDEEDS RSNISTSSKKSSKKRDYWIQKGGM
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0016779 nucleotidyltransferase activity
Cellular Component
None predicted.