Protein
MCA_03448_1
Length
853 amino acids
Gene name: SWI1
Description: SWI/SNF chromatin-remodeling complex subunit SWI1
Browser: contigB:4444466-4447263+
RNA-seq: read pairs 1243, FPKM 18.0, percentile rank 38.5% (100% = highest expression)
Protein function
| Annotation: | SWI1 | SWI/SNF chromatin-remodeling complex subunit SWI1 | |
|---|---|---|---|
| KEGG: | K11771 | SWI1 | SWI/SNF chromatin-remodeling complex subunit SWI1 |
| EGGNOG: | 0QDPZ | FG06071.1 | ARID BRIGHT domain protein (SWI1) |
| SGD closest match: | S000005937 | SWI1 | SWI/SNF chromatin-remodeling complex subunit SWI1 |
| CGD closest match: | CAL0000188874 | SWI1 | Swi1p |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_05635_1 | 49.08% | 650 | 0.0 | MIA_05635_1 |
| A0A0J9X8F7_GEOCN | 43.81% | 662 | 2e-171 | Similar to Saccharomyces cerevisiae YPL016W SWI1 Subunit of the SWI/SNF chromatin remodeling complex OS=Geotrichum candidum GN=BN980_GECA05s02320g PE=4 SV=1 |
| UniRef50_A0A0J9X8F7 | 43.81% | 662 | 5e-168 | Similar to Saccharomyces cerevisiae YPL016W SWI1 Subunit of the SWI/SNF chromatin remodeling complex n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X8F7_GEOCN |
| A0A060TDE0_BLAAD | 32.49% | 874 | 6e-127 | ARAD1D47168p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D47168g PE=4 SV=1 |
| A0A167E6C6_9ASCO | 35.07% | 673 | 2e-108 | Swi1p OS=Sugiyamaella lignohabitans GN=SWI1 PE=4 SV=1 |
| Q6C4K7_YARLI | 29.28% | 683 | 3e-76 | YALI0E25960p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E25960g PE=4 SV=1 |
| A0A1E3PQL3_9ASCO | 29.68% | 630 | 1e-61 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_77550 PE=4 SV=1 |
| A0A1E4THY6_9ASCO | 28.72% | 672 | 4e-49 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_44973 PE=4 SV=1 |
| Q59UR3_CANAL | 24.11% | 734 | 2e-36 | Swi1p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SWI1 PE=4 SV=1 |
| SWI1_YEAST | 27.33% | 450 | 8e-25 | SWI/SNF chromatin-remodeling complex subunit SWI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SWI1 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0030
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
600
700
800
853
Detailed signature matches
no IPR
Unintegrated signatures
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CYTOPLASMIC_D... (C...)
-
-
NON_CYTOPLASM... (N...)
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SM01014 (ARID_2)
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TRANSMEMBRANE (Tran...)
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mobidb-lite (disord...)
Protein sequence
>MCA_03448_1 MIVDLKMSSTPQQQKAAIEAFSRGLSDFFRQRGVNLPSFPPIAGKHIPPYFIFMAIQKLGGFAKVSQNNSWQDVLRILGL NSNPDSVREISLLYIKFIEPYVQFRMQQSSLNQASTNNELHDSPSNTMEHMPQNSQVTDINSRQIEDTHGNINSMQTTEE GYGLSHNIGTSSNISIQQQLPQTETKIYNQDLKPKPMLRLTSEKDNYVPKKRKIEFKGGYDIQLLGRLGKDADKLIPEFP VLGELGIVNLHAITQSLKSSIPGEVRQALDKLALISSNPYYNIILQDCPGLADALGYIGLDLLKYLENNEPIVGLDGKSK MNDTDSAEKHLQTEDYDNDEEDGTDLISSVFTAFSSWDKANDDITFHVDSLTGYPTNEYHNESAIEKLGNMIQDDDTNFN NENSASVSLATNDKSTFPKSSYFGFSSYTDLLDLSKGEVEELHKNNKSHIASFWDESYIDRLICVTMVLRNISFTDLNQP YLAGEPTVMDFLFKLVRILGSSSEVINLRRRQLSIQKNIITLFANLGLHIIIPSIADAFSVLLLILSFSPEQYPFRKNAD GSEFLFFGEYDPLVDRYLGCAIDSLAKMIPRDPPNRTFFHDIFLNTCNDKDYLELLNRYLQGRKLRPFEFLTRTFAMSLS TLPRSDFRVIPKALKLRASLIQQSLLVASNLSSMVPKYGYFDDIIQSLSSSQEHASPLTESLVLPVLEAQTKVNLADIWL NSVESFGPTLLRASCTLRPSEPASDIATTEIYNKITLRTISVLRTLSERAMSFDIAINDSLSNPESQHYSQKMEDISMKV TPGVFPTFEILFSALVSNGMNPFVVSELCQLAEDHSNYFNNVKSLQQKYKTLK
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003677 DNA binding
Cellular Component
None predicted.