Protein
MCA_03445_2
Length
172 amino acids
Browser: contigB:4440960-4441751+
RNA-seq: read pairs 56868, FPKM 4061.6, percentile rank 99.1% (100% = highest expression)
Protein function
| KEGG: | K02882 | RP-L18Ae | large subunit ribosomal protein L18Ae |
|---|---|---|---|
| EGGNOG: | 0PJYU | RPL20 | 60s ribosomal protein l20 |
| SGD closest match: | S000005839 | RPL20B | 60S ribosomal protein L20-B |
| CGD closest match: | CAL0000200399 | RPL20B | 60S ribosomal protein L20 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_05632_1 | 92.44% | 172 | 6e-117 | MIA_05632_1 |
| A0A0J9XFD0_GEOCN | 83.04% | 171 | 2e-105 | 60S ribosomal protein L20 OS=Geotrichum candidum GN=BN980_GECA13s01044g PE=3 SV=1 |
| A0A060TB76_BLAAD | 82.46% | 171 | 6e-105 | 60S ribosomal protein L20 OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D25762g PE=3 SV=1 |
| Q6C0J5_YARLI | 74.27% | 171 | 2e-98 | 60S ribosomal protein L20 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F24123g PE=3 SV=1 |
| A0A1E3PFZ5_9ASCO | 75.60% | 168 | 1e-95 | 60S ribosomal protein L20 OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_71509 PE=3 SV=1 |
| UniRef50_A3GGB0 | 71.93% | 171 | 3e-90 | 60S ribosomal protein L20 n=117 Tax=Eukaryota TaxID=2759 RepID=A3GGB0_PICST |
| A0A1D8PLC9_CANAL | 71.35% | 171 | 2e-92 | 60S ribosomal protein L20 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RPL20B PE=3 SV=1 |
| RL20B_YEAST | 71.93% | 171 | 6e-92 | 60S ribosomal protein L20-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPL20B PE=1 SV=1 |
| A0A1E4TKZ0_9ASCO | 70.76% | 171 | 1e-90 | 60S ribosomal protein L20 OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_86731 PE=3 SV=1 |
| A0A161HHS4_9ASCO | 80.00% | 145 | 1e-84 | 60S ribosomal protein L20 OS=Sugiyamaella lignohabitans GN=RPL20B PE=3 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1586
Protein family membership
Domains and repeats
-
Domain
1
20
40
60
80
100
120
140
160
172
Detailed signature matches
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MF_00273 (Ribosomal...)
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-
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PIRSF002190 (Riboso...)
-
-
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PF01775 (Ribosomal_...)
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no IPR
Unintegrated signatures
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SSF160374 (RplX-like)
Protein sequence
>MCA_03445_2 MGRLNEYQIIGRRLPSESEPEPKLYRMRIFAPNTVVAKSRFWYFLTKLRRIKKAAGEIVSVNLIHEKTPTKVKNFGIWIR YDSRSGTHNMYKEYRELSRAAAVEALYQDMAARHRARFRSIHILKVAEIENVDDIKRQYIRQLTTPDLKFPLTHFVEKTN ELFVTKRPATFN
GO term prediction
Biological Process
GO:0006412 translation
Molecular Function
GO:0003735 structural constituent of ribosome
Cellular Component
GO:0005840 ribosome