MCA_03442_1

Protein

Length

470 amino acids

Gene name: POL31

Description: DNA polymerase delta small subunit

Browser: contigB:4434043-4435648+

RNA-seq: read pairs 606, FPKM 15.9, percentile rank 35.3% (100% = highest expression)

Protein function

Annotation:		POL31	DNA polymerase delta small subunit
KEGG:	K02328	POLD2	DNA polymerase delta subunit 2
EGGNOG:	0PFYC	FG07164.1	DNA polymerase
SGD closest match:	S000003766	POL31	DNA polymerase delta small subunit
CGD closest match:	CAL0000186510	HYS2	DNA-directed DNA polymerase delta subunit

Protein alignments

	%id	Aln length	E-value
A0A0J9XED7_GEOCN	52.09%	478	6e-169	Similar to Saccharomyces cerevisiae YJR006W POL31 DNA polymerase III (Delta) subunit OS=Geotrichum candidum GN=BN980_GECA12s00197g PE=4 SV=1
UniRef50_A0A0J9XED7	52.09%	478	1e-165	Similar to Saccharomyces cerevisiae YJR006W POL31 DNA polymerase III (Delta) subunit n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XED7_GEOCN
MIA_05629_1	53.96%	454	2e-162	MIA_05629_1
A0A1E3PMC5_9ASCO	43.37%	475	3e-131	Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_82357 PE=4 SV=1
A0A060T813_BLAAD	41.12%	445	1e-116	ARAD1B24398p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B24398g PE=4 SV=1
Q5AK60_CANAL	35.85%	463	1e-90	DNA-directed DNA polymerase delta subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=HYS2 PE=4 SV=1
A0A167DB30_9ASCO	42.98%	349	6e-91	Pol31p OS=Sugiyamaella lignohabitans GN=POL31 PE=4 SV=1
DPOD2_YEAST	37.98%	466	1e-87	DNA polymerase delta small subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=POL31 PE=1 SV=1
Q6CA81_YARLI	37.37%	471	1e-86	YALI0D05093p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D05093g PE=4 SV=1
A0A1E4TG44_9ASCO	45.20%	177	8e-45	Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_31590 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1472
Predicted cleavage: 12

Protein family membership

None predicted.

Domains and repeats

Domain
192 - 421
DNA polymerase alpha/epsilon, subunit B (IPR007185)

1 50 100 150 200 250 300 350 400 470

Detailed signature matches

IPR007185

DNA polymerase alpha/epsilon, subunit B
1. PF04042 (DNA_pol_E_B)
  
  192 - 421
  
  Pfam
  PF04042 (DNA_pol_E_B)

Protein sequence

>MCA_03442_1
MTATSTNAFRPVVEFKPAANNDFRLSMEQRQYDVQYANIYLKRLSQTRQKAYKQGYDAWSDMIIENNPVKYSEKVLEVGR
NKYCWVVGTIYREMKLKPSILEEVSASHFGAPPPPPEKYTTGDDNIFLEDESGRVKIVGHEVTTRVLVTGCIVAVLGSEL
TSGDFETIDIRFPEYAIQPPLPSFEDSEPRYIALISGLSISKMTNSEIKLQLLQEFLSGELGGEKEEDITSKIVHLIIAG
NSLSDSVFEDCEITTGFGTLQVNQSKIQTDLSQISSDPSNRLDQFLNDIVATVPVSIMPGETDLSNVTLPQQPLHPALFQ
NSRRFQNNEPSFNTVTNPNLWNFNDIHVLGHSGQPINDMCKYIAEKDVDRLDLMNQTLRWQIIVPTAPDTLASYPYTTKD
PFSLSTTPHIYFSGNQPYFDTCLITGKSDEGSNIKVRLITIPDFSKTGEIVLVNISEKSFPVFSVKIVEN

GO term prediction

Biological Process

GO:0006260 DNA replication

Molecular Function

GO:0003677 DNA binding
GO:0003887 DNA-directed DNA polymerase activity

Cellular Component