Protein

MCA_03409_1

Length
214 amino acids

Browser: contigB:4360891-4361536-

RNA-seq: read pairs 97, FPKM 5.6, percentile rank 18.5% (100% = highest expression)

Protein function

EGGNOG:0PTGHRecQ-mediated genome instability protein
SGD closest match:S000005945RMI1RecQ-mediated genome instability protein 1

Protein alignments

%idAln lengthE-value
A0A0J9X891_GEOCN34.22%2254e-32Similar to Saccharomyces cerevisiae YPL024W RMI1 Subunit of the RecQ (Sgs1p)-Topo III (Top3p) complex OS=Geotrichum candidum GN=BN980_GECA05s02001g PE=4 SV=1
UniRef50_A0A0J9X89134.22%2258e-29Similar to Saccharomyces cerevisiae YPL024W RMI1 Subunit of the RecQ (Sgs1p)-Topo III (Top3p) complex n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X891_GEOCN
MIA_05640_135.75%2072e-30MIA_05640_1
A0A060T607_BLAAD24.65%2152e-11ARAD1B12166p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B12166g PE=4 SV=1
A0A1E3PL14_9ASCO27.50%2002e-09Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_51163 PE=4 SV=1
RMI1_YEAST25.67%1879e-07RecQ-mediated genome instability protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RMI1 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0354

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 20 40 60 80 100 120 140 160 180 200 214

Detailed signature matches

  1. Domain IPR013894
    RecQ mediated genome instability protein, N-terminal
    1. PF08585 (RMI1_N)

Protein sequence

>MCA_03409_1
MISFLEADISQTSADNIDFMGNPTLKEAFSNYLPNAIYQAKSQTFTKPLLFQILLVIDMSKSLVRTLEALESLPPNITSL
SEYTQNENSANQPRRIIRVQDISTEETGDEITSPEDNVTANDLFKAGKNSIHKLILQDSQGRKFYGIEQQPINGIGIQTP
LGGKVLLSNIEFKYGVAILSSNNTQFLGGCVSVINRNSRERLKDYIQKQQGQQS

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.