Protein
MCA_03407_1
Length
856 amino acids
Browser: contigB:4356724-4359434-
RNA-seq: read pairs 1231, FPKM 17.7, percentile rank 38.1% (100% = highest expression)
Protein function
| KEGG: | K11446 | KDM5 | histone demethylase JARID1 [EC:1.14.11.-] |
|---|---|---|---|
| EGGNOG: | 0PFAK | FG05855.1 | PHD transcription factor (Rum1) |
| SGD closest match: | S000003880 | JHD2 | Histone demethylase JHD2 |
| CGD closest match: | CAL0000199580 | orf19.5651 | Histone demethylase |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A0J9X930_GEOCN | 53.90% | 449 | 5e-165 | Similar to Saccharomyces cerevisiae YDR096W GIS1 JmjC domain-containing histone demethylase and transcription factor OS=Geotrichum candidum GN=BN980_GECA05s05521g PE=4 SV=1 |
| UniRef50_A0A0J9X930 | 53.90% | 449 | 1e-161 | Similar to Saccharomyces cerevisiae YDR096W GIS1 JmjC domain-containing histone demethylase and transcription factor n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X930_GEOCN |
| MIA_05638_1 | 46.94% | 571 | 6e-167 | MIA_05638_1 |
| A0A167D489_9ASCO | 46.82% | 425 | 3e-115 | Jhd2p OS=Sugiyamaella lignohabitans GN=JHD2 PE=4 SV=1 |
| A0A060T5J9_BLAAD | 43.46% | 405 | 2e-112 | ARAD1B12210p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B12210g PE=4 SV=1 |
| Q6CEM8_YARLI | 46.15% | 390 | 2e-107 | YALI0B14443p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B14443g PE=4 SV=1 |
| A0A1E4THJ7_9ASCO | 45.30% | 415 | 1e-103 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_31936 PE=4 SV=1 |
| A0A1D8PL24_CANAL | 35.57% | 447 | 2e-78 | Histone demethylase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.5651 PE=4 SV=1 |
| JHD2_YEAST | 35.75% | 442 | 4e-65 | Histone demethylase JHD2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=JHD2 PE=1 SV=1 |
| A0A1E3PKC8_9ASCO | 48.64% | 220 | 1e-58 | Uncharacterized protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_46486 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0668
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
600
700
800
856
Detailed signature matches
no IPR
Unintegrated signatures
-
-
SSF51197 (Clavamina...)
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cd15517 (PHD_TCF19_...)
-
mobidb-lite (disord...)
Residue annotation
-
Zn binding site cd...
-
histone H3 binding...
Protein sequence
>MCA_03407_1 MPTYTEDSKRPFGIPEPPTFYPTTDEFSDSYNYINSIAEEGKKYGIVKVVPPSSWNPSFSLDTGKLRFKTRRQTLNTMGA QTRVVIDWTKRLVMFHKMLGKNIEAHPEISPSSYLNYYSLLNHVLTLGVHQKIEDLQLWIALSNDMGFPQSTSKIKSVPQ YLKKTYCEIIVPFVQHLEFLESTGLRSGHSKLPIRSLNKTPVSKSDDSKYKLSYIKLFKEEHPVNPYLSIPHIPRIEFNQ TKSVKKNEHKKPSRKRTISKSSDSSQSNDRDADEDDSEYVAICEVCNKGCFTDNDLFIDCKECEESFHLACIKNKPMFFP RINSKFSSSPDSPDDWVCPKCLVGTYDFGFEPGDTYSMDSFEDFASDFEEDYMTQNPELIELSSEEAESALEKQFWRYVN STGDSLTVEYGSDIQDTSGFPTRVDTHNKYSKDSWNLNNMPLHKNSLFHHINSDISGMTVPWLYIGMMFSTFCWHSEDHY TYSVNYQHFGATKTWYGIPESYAEAFEKAVRELTPELFEKQPRILSQLVTMISPDLLLKKNVPCYAVNQHPGEFVITFPK AYHSGFNHGYNCNEAVNFAPPDWLPYGAESVKSYQQVYRAPVFSFDRLMIKTAICDKRQETAKWFFPQFKKMIDDEIGMR IKIMEKFPLVPIYINSNEISEEDYQCCVCSSLPYMSRFVVRPAGTAPRDVRLKPYYKDNDYPWTKNKTQTESKPASKRGR PPKNRSETPQKAKVAKKRGRPRKSQEPPMDLEGNSPKGKQSSTFQFTSERSLKKYIQNLVGIKDLYISDDEEESDEDSDG DSESINLKKREQSFSSVVCPLHIPEKLESTLMLEFHLKFTNKELLELAYELEQRLF
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003677 DNA binding
Cellular Component
None predicted.