Protein
MCA_03400_1
Length
865 amino acids
Description: Protein with a Staphylococcal nuclease domain
Browser: contigB:4335893-4338491+
RNA-seq: read pairs 3645, FPKM 52.0, percentile rank 66.2% (100% = highest expression)
Protein function
| Annotation: | Protein with a Staphylococcal nuclease domain | ||
|---|---|---|---|
| KEGG: | K15979 | SND1 | staphylococcal nuclease domain-containing protein 1 |
| EGGNOG: | 0PHEC | FG08722.1 | Nuclease domain-containing protein 1 |
| CGD closest match: | CAL0000188608 | CAALFM_CR09330CA | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_00187_1 | 59.82% | 876 | 0.0 | MIA_00187_1 |
| A0A0J9X3D5_GEOCN | 57.29% | 871 | 0.0 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA02s03486g PE=4 SV=1 |
| A0A060T6M7_BLAAD | 52.28% | 876 | 0.0 | ARAD1B13354p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B13354g PE=4 SV=1 |
| A0A167FYW5_9ASCO | 49.32% | 878 | 0.0 | Transcription factor, putative OS=Sugiyamaella lignohabitans GN=AWJ20_3526 PE=4 SV=1 |
| UniRef50_A0A167FYW5 | 49.32% | 878 | 0.0 | Transcription factor, putative n=3 Tax=Saccharomycetales TaxID=4892 RepID=A0A167FYW5_9ASCO |
| A0A1E3PE44_9ASCO | 41.76% | 898 | 0.0 | Uncharacterized protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_13590 PE=4 SV=1 |
| Q6CFT8_YARLI | 40.02% | 892 | 0.0 | YALI0B03960p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B03960g PE=4 SV=1 |
| A0A1E4T9V1_9ASCO | 35.31% | 909 | 3e-142 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_3171 PE=4 SV=1 |
| A0A1D8PTZ1_CANAL | 32.28% | 917 | 2e-122 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CAALFM_CR09330CA PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0773
Protein family membership
Domains and repeats
-
Domain
-
Domain
1
100
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300
400
500
600
700
800
865
Detailed signature matches
-
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PIRSF017179 (RISC-T...)
-
-
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PF00567 (TUDOR)
-
no IPR
Unintegrated signatures
-
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SSF63748 (Tudor/PWW...)
Protein sequence
>MCA_03400_1 MFSARVKSIVSGDTIAFDNGKQISLAYVSAPRSTEPYGFQSREYLRKFIVGKPVKYRVHYTINNRDYGDVSAPVFTSLIE KSLTDGNVKLRDDAQSRIPFPEIYENYEKAQENAKTENLGLWGPEVASVEVSQIVPDDLYNSGKEYKAIVEKVVAGDRVQ IRVIEDNSENSHILTNALIAGIKSPRSSGGPDGAPGEPFGDAAKKFSEDRLLQRAVTVEFLGKSTSGLPIVQLLHPVGNI AVFLLNQGLATIADWQSAQLGAQRMSALRAAEKTAKDGRLNLWKDLAQTPKQTTASKNSNNFKATIAKIISADTYVLKLA STGKEETVQLTSIRAPRKSDAPEVAPYAPISKEVARKNFIGKEVNVTVDAIRPESAQFEERRLVTLVTIPEGKNVGEFLV ESGYATVIRHRKDDNDRSPNWDELLEKEKSSIEAGKGIHGKKTPPVDRTVDASETAARAKTYLTNLTRQGKINGVVDHVS TAGRIRIHVPRLNLILTLVHTGVRVPRPQEPYGQQALDYVSDHFYQRDVVFSVENVDKTGAFIGTVYTPGTNEPLPVVLV KMGLAEVHEYSAQQSHISRELFSAQEEAQDAHLNIWANRKSDKEKEKEISQAMAASAAEQEKAKSAGTQKNYVDITVTNV SKNGEVYYRLGSMDAKFKKMSSDLVSYNNSAANSSTFNFAHPPKKGEYVTALPGFIRGRIISFDKPSKTYTIQELDTGKV KTLPASKLRPLPAQFGTKTYPEFAKSAVLSFVKLPPTSTPDYLDEYIETLKSLVEGKRLAANVDSPPTITPQSITIYTEK STGPNDSVNSYLIDEGYAFVKNKLSTWEKWDTWKSTLAALKDLQIKAQEDHIGVWEYGNVDSDEE
GO term prediction
Biological Process
GO:0031047 gene silencing by RNA
Molecular Function
None predicted.
Cellular Component
GO:0016442 RISC complex