Protein
MCA_03397_1
Length
148 amino acids
Browser: contigB:4329480-4329927+
RNA-seq: read pairs 681, FPKM 56.5, percentile rank 68.0% (100% = highest expression)
Protein function
| KEGG: | K12876 | RBM8A | RNA-binding protein 8A |
|---|---|---|---|
| EGGNOG: | 0PPRS | FG04914.1 | RNA-binding protein 8A |
| SGD closest match: | S000003012 | RNA15 | mRNA 3'-end-processing protein RNA15 |
| CGD closest match: | CAL0000192627 | MRD1 | Multiple RNA-binding domain-containing protein 1 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_00190_1 | 67.02% | 94 | 2e-42 | MIA_00190_1 |
| A0A0J9XAS1_GEOCN | 66.28% | 86 | 8e-39 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA07s03607g PE=4 SV=1 |
| UniRef50_D4AVU8 | 55.26% | 114 | 7e-36 | Transformer-SR ribonucleoprotein, putative n=23 Tax=Pezizomycotina TaxID=147538 RepID=D4AVU8_ARTBC |
| A0A1E3PKY3_9ASCO | 64.37% | 87 | 2e-38 | RNA-binding protein 8A OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_41973 PE=4 SV=1 |
| Q6C7A0_YARLI | 51.19% | 84 | 4e-27 | YALI0E02530p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E02530g PE=4 SV=2 |
| A0A060TCY9_BLAAD | 33.75% | 80 | 8e-11 | Eukaryotic translation initiation factor 3 subunit G OS=Blastobotrys adeninivorans GN=TIF35 PE=3 SV=1 |
| RNA15_YEAST | 33.73% | 83 | 2e-09 | mRNA 3'-end-processing protein RNA15 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RNA15 PE=1 SV=1 |
| A0A1E4TL65_9ASCO | 28.18% | 110 | 4e-09 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_87448 PE=4 SV=1 |
| MRD1_CANAL | 31.94% | 72 | 2e-08 | Multiple RNA-binding domain-containing protein 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=MRD1 PE=3 SV=2 |
| A0A167DKY8_9ASCO | 31.58% | 76 | 3e-09 | Tif35p OS=Sugiyamaella lignohabitans GN=TIF35 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0127
Protein family membership
- RNA-binding motif protein 8 (IPR008111)
Domains and repeats
-
Domain
1
20
40
60
80
100
120
148
Detailed signature matches
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Residue annotation
-
polypeptide substr...
Protein sequence
>MCA_03397_1 MSTMEVDPPSPERRHDMQVDEEDHSKDVPSIKSVEGWVLIVTNIHEEATEEDVYDFFSEFGNVQNLHLNLDRQTGYVKGY ALIEYQTAEEAQIAIKDGNGQELLGNLITVDFAFLQDREGQDKRNLRERHTRNRSRSRSRSRSPASYI
GO term prediction
Biological Process
GO:0006396 RNA processing
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0003729 mRNA binding
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm