Protein

MCA_03347_1

Length
488 amino acids

Description: protein with DDE superfamily endonuclease domain

Browser: contigB:4114559-4116026-

RNA-seq: read pairs 305, FPKM 7.7, percentile rank 21.9% (100% = highest expression)

Protein function

Annotation:protein with DDE superfamily endonuclease domain
EGGNOG:0PVG4Pfam:DDE

Protein alignments

%idAln lengthE-value
UniRef50_A0A1K0H1D427.72%4046e-27Uncharacterized protein n=3 Tax=Ustilago bromivora TaxID=307758 RepID=A0A1K0H1D4_9BASI
A0A1D8PTV2_CANAL25.34%3635e-21Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CAALFM_CR09050CA PE=4 SV=1
MIA_01692_126.30%2703e-18MIA_01692_1
Q6C7B4_YARLI21.50%3219e-07YALI0E02178p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E02178g PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0902

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 50 100 150 200 250 300 350 400 450 488

Detailed signature matches

  1. Domain IPR004875
    DDE superfamily endonuclease domain
    1. PF03184 (DDE_1)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil

Protein sequence

>MCA_03347_1
MIGTIKWARDEDYFIRVENAVKEYYSDEYDGPIKFLATKYNVNYKTLYDRIKGKTNGRGTFSLHEWQERLIEADLIFLIQ
NKTPWNQHQTRKFAAKLKGKEGPLSPSWVLGFLKRHPKFLIADTGHLDILQNEETAESPISIFFKEYFFYVNNLKVAQDR
IFYLDEACFRIESLNSAQIVIPGRASHIKSYDCLEFLTVLEFISKDGTIGEPLFVCKGDDYVMTGWSETAEHTYINFALS
SNGFINEDAFIGWIDSQFSKYTDGEIRLLIMDGHFSQISTEVLQKLNKYNVVPINLPRDMTTILQPSDRIPFENFKLLFE
NESNDDVSEGLSLQKKNFINNYLNQRLSAYSLKVIEKGFDRCGLNCNDQESALAQYQLKSEKVLAKNRSFEQLASEQPFE
IPKRSAKYLERAKRKEMLQNLEPAVSKSIREQLHEHEQTIKKLKTEIQFYWERSYQLQQKCDRLNDLLPESKRIKSSKME
RVLTPPPS

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003676 nucleic acid binding

Cellular Component

None predicted.