MCA_03333_1

Browser: contigB:4081126-4086685-

RNA-seq: read pairs 15, FPKM 0.1, percentile rank 3.6% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0315

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. CYTOPLASMIC_D... (C...)
   1,852 - 1,852

   PHOBIUS
   CYTOPLASMIC_DOMAIN (Cytoplasmic domain)
2. NON_CYTOPLASM... (N...)
   23 - 1,833

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
3. SIGNAL_PEPTIDE (Sig...)
   1 - 22

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
4. SIGNAL_PEPTID... (S...)
   18 - 22

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
5. SIGNAL_PEPTID... (S...)
   4 - 17

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
6. SIGNAL_PEPTID... (S...)
   1 - 3

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
7. SignalP-noTM
   1 - 22

   SignalP euk
   SignalP-noTM (SignalP-noTM)
8. TRANSMEMBRANE (Tran...)
   1,834 - 1,851

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)
9. mobidb-lite (disord...)
   1,511 - 1,811

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   1,263 - 1,283

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   1,360 - 1,379

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   993 - 1,042

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   481 - 866

   MobiDB Lite
   mobidb-lite (disorder_prediction)

Protein sequence

>MCA_03333_1
MMKILTTILFAIASILIQGSSASPLFTDISQYGGVYNWPHHGDFAVDIEESSEKLKRQNDLIVLLPGVAQSCLPRIVSTA
AACESYCNVVIGTLRTNNLIVNDLLCVPQNAPVNSNPKRGEPYGSLTNYRVVILACLECAKTVTSTSANLLKTMLEPCNN
PPAPLPNCNTASCLSTVQSDKFNNPATCQQECTSLLDQIDKSWILKEEKDFKASHCYTTFTFLPRLTACRRCPTASYLIP
RINTLRTNCDLFGTTNIWMEQCPLVEPSKISTSPTETQTPIAGLNPIPDGNGCLPNMISSDPGCQNFCELVIRTLEERNG
IVSNSVCVPKNANPNNTPNPGKMYMPGFAPVILGCRNCDPDGKTEAGAKMKQLISQCDDDRLVPIRCSGGCYKLDNKPDF
VDPDRCGAACAAYMNTYRADIIKGTGSSFYCWGLITRAQDLNACRNCPDKDLYIDELNGFIKNCDIVDQYAYNIEQCPET
TTTTTTTTTSETSMESSDISISDEETLTSINESITTSINEENSISDDSGSTKSSSASDGSTSSAEPSPSSEESSTSAESL
SSSEESSTSAESSSSSDASSASAEPSSSSDASSTTEESSSSSDASSASAEPSSSSDASTTTEEPSSSSDASSTTEESSSS
SDVSSASAKPSSSSQENSTSAEPSLSSDASSASAESSLSSDASSATKEPSSSGDASSASAEPSSSSEESSTSAKPSLSSD
ASSESAESSLSSDASSTTEESSSLSDTSSASAESSSSSDASSASAEPSSSSDASPTTEEPSLSSDASSASAEPSSSSEES
STSAEPSLSSDESSTTEESSSLSDTSSASAESSSSSDASSASAEPSSSSDASSTTEEPSLSTEVSFFSPEPSTYIISISF
DSTDHTHGQSATSQLSVSLAPGTFPTSFTTTTDATLLSTSTSTTGTTFISTLTDSSSHLSKSTLFNETISVPVDSSLSNT
ITTHLIESLVSSTHTSVLTEFLTSSHITSQSEQLSISSRIDQTSDGSSRSTVNSHSTTESIVPTDIPTVLEPSTDRSYTT
SSLADTMSSGSVMISFTSVSSTTSVTSYTEPTESISTVDSSKIGSSYMSVSVSSASYVTTTAKRSEFSSVQSPSLTKSWI
NSSIEQTSTSFIKTRGNESKTFDTTVSTTEETGSSISTKVVETNSSQTSAISSSASLSTPSTIPFTVEQCAPYCVYIRDK
LSNNAQSSQICDTLNLIEDQLLANCLRCVEKYSELNAPELPGKAVLDGLETCQILPSQRAYYPIPIPDDKGTTSDSRLTE
TTSQSLDDTSTIISFSTASLGLSTDTSETTKLSTVPIVTDSSTQSIVIPSSSDISTALSSLISLDPSSAETSTNSIIDTE
TQRTHKTSTTIDTTSTPVPTDDSFTKEQCSIYCLYIANQLEIDSTPTEQCSTLVTMNDQIIANCFHCRKKYTEVALSDIG
KKIIEAFNGCSILPSERPYKDIELVTGSIWFTGTSTNVMSTSVTTTLLSSESGGSLSTFITKSHIATTEALTSSTTNNGQ
SSAISTMTDSNINGQPRPTESSSSSQLSSQLASLQPTGNSQSVINTRTTDSNSNGPESSKSSYNNQLSRTSSKDKQTTLS
QSSKAQSSDNGQVGPIPRPTQSSDNGQIAPRPHPTGFDDHSQTSLDSTSFKPNDSWLNSPAPQPTQPLPNDQNSENSQNF
QNDASSASVGGQQQIRPRPNKPDFSTPSSIANSNSPQDEQFPKPADQQVAGPNDGFNDGFNDGSNVGLQGTDGSNPQSGS
DNTPHNDNDQNGIGNGLLPNQDNDDSDSDNNNSNGILPNQDNGDSNSNSNTVLADNIEQTMIDQVNFGHRSSTASILSLV
VSFLIMISSSYF

GO term prediction