MCA_03328_1

Browser: contigB:4052499-4055835+

RNA-seq: read pairs 0, FPKM 0.0, percentile rank 0.8% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0038

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. CYTOPLASMIC_D... (C...)
   1,111 - 1,111

   PHOBIUS
   CYTOPLASMIC_DOMAIN (Cytoplasmic domain)
2. NON_CYTOPLASM... (N...)
   20 - 1,089

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
3. SIGNAL_PEPTIDE (Sig...)
   1 - 19

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
4. SIGNAL_PEPTID... (S...)
   15 - 19

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
5. SIGNAL_PEPTID... (S...)
   6 - 14

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
6. SIGNAL_PEPTID... (S...)
   1 - 5

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
7. SignalP-noTM
   1 - 19

   SignalP euk
   SignalP-noTM (SignalP-noTM)
8. TMhelix
   1,088 - 1,110

   TMHMM
   TMhelix (TMhelix)
9. TRANSMEMBRANE (Tran...)
   1,090 - 1,110

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)
10. mobidb-lite (disord...)
    277 - 964

    MobiDB Lite
    mobidb-lite (disorder_prediction)

Protein sequence

>MCA_03328_1
MIIYKLLFISFYLAVNSLALIIEPDYYNLQISNNEFNTELKSAKFESHFVQNGFSKRQVLISPTDTNEKACLPPFIMSPQ
GCSNWCETVYGVLFHAYVYTGPGTVCAPAEGGDPQYPALPGQPYSSVVDEYRDSIVACVKCSETYPNQYGSNNIELLENC
QGNFDNDLPQCEDLCVDIEEIEASGTCDEICSRVVSSMAPVITRPPSETRKKRQVPGGRQDEYWCRVIRQNYFEMNECLI
CNGGRDQSIVNHISEFGDKCLYYDDSPEYMMTTCQLPSSTSLSDRTVTDEQSTTISFSESASETQTTDESSTTDSTSESA
SETQTTDESSITDSTSENASETQTTDESSTTDESSITDSTSESASDTQTTDESSTTDSTSESASETQTTDESSITDSTSE
NASETQTTDESSTTDESSITDSTSESASDTQTTDESSTTDSTSESASETQTTDESSTTDSTSESASDTQTTDESSTTDES
SITDSTSESASDTQTTDESSTTDSTSESASETQTTDESSTTDESSITDSTSESASDTQTTDESSITDSTSESASDTQTTD
ESSTTDESSTTDSTSESASDTQTTDKSSTTDSTSESASETQTTDESSITDESSTTDSTSESASDTQTTDESSITDSTSES
ASDTQTTDESSTTDSTSESASDTQTTDESSTTDSTSESASETQTTDESSTTDESSITDSTSESASDTQTTDESSTTDSTS
ESASETQTTDESSITDESSTTDSTSESASDTQTTDESSITDSTSESASDTQTTDESSITDSTSESASDTQTTDESSTTDS
TSESASETQTTDESSITDESSTTDSTSESASDTQTTDESSTTDSTSESASDTQTTDESSTTDSTSESASETQTTDESSTT
DESSITDSTSESASDTQTTDESSTSSSISEHSTKNPSDSISVTTSIVNSVSEPDSGTPIVTITLTRPPGATDTGTSTISD
PGAGTITVIVPPGGTPIVTITSTRPPGATDTETFTISDPGAGTISIIVPPRKTETLTNSFTTPYYATDLVSSSFLDTVSN
PYFISQLSLTATHHHDNSIVSISVSYMNPSFLEPPSSTSVDLEQVNSSSLLRTNIVLLILSHLLFFIFFLQ

GO term prediction