MCA_03326_1

Browser: contigB:4029864-4034274+

RNA-seq: read pairs 1, FPKM 0.0, percentile rank 1.6% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0299

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. CYTOPLASMIC_D... (C...)
   1,469 - 1,469

   PHOBIUS
   CYTOPLASMIC_DOMAIN (Cytoplasmic domain)
2. Coil
   1,469 - 1,469

   COILS
   Coil (Coil)
3. NON_CYTOPLASM... (N...)
   19 - 1,448

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
4. SIGNAL_PEPTIDE (Sig...)
   1 - 18

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
5. SIGNAL_PEPTID... (S...)
   15 - 18

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
6. SIGNAL_PEPTID... (S...)
   3 - 14

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
7. SIGNAL_PEPTID... (S...)
   1 - 2

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
8. TRANSMEMBRANE (Tran...)
   1,449 - 1,468

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)
9. mobidb-lite (disord...)
   1,240 - 1,411

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   732 - 843

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   1,004 - 1,063

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   263 - 292

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   1,158 - 1,218

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   665 - 689

   MobiDB Lite
   mobidb-lite (disorder_prediction)

Protein sequence

>MCA_03326_1
MKASSCLLFAMGGIQTLGTNGNPIHGKHLKKGSTAIELDSKSFFDTTENIELDKRQSPTNNLACLPELVTTADACNGFCG
ILYNGLVRDYQGTPEFDANNLSVCFAASGQLKNNVVNGFAHQLRVCRQCGKNTNTAAYNKVNNIFRHCNANKFDDYLEIK
QCKGCFDRTAVNNYFDPTTCRANCQTLIDATDSFIFGTSGSSQWKSSNCWGLFYNVPKLGTCLECSELKGAMRQKINGYA
TNCDLIQGAPWIDVCPAVPSSTTSASTSTSTTSATPNSVSISATRPTLSAGPTAPTIPNTGCLPEMVNVLNACNSFCDIL
YNGLVRDYRGTPEFDEANLSVCFTTSGELKNNVVNNFAHPLRVCRQCGKDTNTAAYTKVNNIFRHCNAIKFDDYLEIKQC
EGCVDRTDADKYIDPTTCRANCQKLVDTTENFILGTTGSSEWKSSNCWGLFYNVPRLSACLDCSELTEAMRQKITGYSTN
CDLIQKAPWMDVCPDSSSSTTLTSLSFAISTLSSVIDSQTTSSSYNTQSSVTSNLSNDLSLATSDSYSTQDSALSSVSSA
ISSPSTLTSFSVSSAISSPSTLTSFSVSSTTSNTDTSTNSFITSVASSTSALASSDVSETQNTVISSINSNTGISTFFSV
SSITSNTDTSTTFSITSAASSSSASASSDVSETSNTSTSTSSSISSNTSNIGTSTNSFISSTNISTNSFISSAASSPGTS
TTSSITSAASSTSSLASSNVSETQNTGTSTISSISSITSDTTTLASSTGSETSISSTTTIDTERSGATTTTNPVSSNDLS
ESTSGSLSEESSTVSISESTTIGTSSTAAGVTPPSQSSAMSSHSITLTTTPHFTFTNFSTSVFTSASALPSIPETCRDYC
SYVATQIEGASNDLVQQCLVFRSIDTQLVANCVRCVEAYPDLEVTYLPAITVLDSLDSCGMSLPTNRYLTISIPGTSVDS
SSTMSYSSVSATASADESSILTLTTTGPSSTQVSVSSFNTNISEETVSSSDSGSQSSTSAEPSGLTSSSEAKPSTSQSSV
SDSVSFSSEFNSESSSDSTSMSTSVIHTSAVPTTTQLPYTKAQCNKYCIYIDQKQDNLPQTERCSNLESIDDQIVSNCLR
CVESYTDLNTPSEPAGKLLGELSYCNIAPIYREYKEVDLPQSPTDTSDHNATSDISESTSSVGDGASQGSNTDKSVQTST
VNSDKPVNSASGQTSDSYSRTAMSINTKFYFEETQIASQSGSLSSDSNTIGQPQVTSSSNGGEDEPIISQPQPTSSNGDG
QALPKPHETQQSSTPNSNNHTGSQPDTDSSGKNGSSAPTGGDGLENQNLASPSQGGGQESYNLDDEDVSNTDNGTNSGSK
TESDQSNQPHQSDQSNAGLPESSTHSGEKLGNKQPSDSSSSGSQSSNDNEVLDENKDDLALGFTNRIGGIPHISENGNNT
SANQANTEFSLSFHVVFSCLMAFAIIMFV

GO term prediction