Protein
MCA_03306_1
Length
279 amino acids
Browser: contigB:3980758-3981672-
RNA-seq: read pairs 482, FPKM 21.3, percentile rank 42.9% (100% = highest expression)
Protein function
| EGGNOG: | 0PRZW | FG05217.1 | U4 U6.U5 tri-snRNP-associated protein |
|---|
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_06164_1 | 62.71% | 59 | 2e-22 | MIA_06164_1 |
| A0A060TFU7_BLAAD | 62.69% | 67 | 2e-21 | ARAD1D25938p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D25938g PE=4 SV=1 |
| UniRef50_A0A060TFU7 | 62.69% | 67 | 4e-18 | ARAD1D25938p n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060TFU7_BLAAD |
| A0A1E3PT20_9ASCO | 64.91% | 57 | 2e-20 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_48625 PE=4 SV=1 |
| A0A0J9X8V8_GEOCN | 67.24% | 58 | 3e-20 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA06s01429g PE=4 SV=1 |
| A0A167C5A1_9ASCO | 61.11% | 54 | 4e-16 | U4/U6.U5 small nuclear ribonucleoprotein OS=Sugiyamaella lignohabitans GN=AWJ20_4037 PE=4 SV=1 |
| Q6C9Q5_YARLI | 57.69% | 52 | 2e-12 | YALI0D09163p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D09163g PE=4 SV=1 |
| A0A1E4TD37_9ASCO | 38.32% | 107 | 4e-12 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_46078 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.2808
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
279
Detailed signature matches
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)
Protein sequence
>MCA_03306_1 MSSRARKVRASDFTSDNSSNAKTSSSSYKSRSRSPEGRRSDYSRSSDYDRREQRYRDEDRYRGRDLDRDRYRDRGRGRAR DRSRSRERESRRDHRNSDRDWDKERANRRNRSRSRERYDQESINRREEPKDIRDPKSLDDKSEATSLEPSLQVKETKAAK EEQSKPKTQERQQSLNGNEIKTNPESSKDKKKRRRNKKNKANTKDDGSEDIQVEEIDQQMMAQMLGFSTFDSTKDKHVAG ADVSGVAKEKASTYRQYMNRKGGFNRELSPPPDERKHKN
GO term prediction
Biological Process
GO:0008380 RNA splicing
Molecular Function
None predicted.
Cellular Component
None predicted.