Protein
MCA_03301_1
Length
655 amino acids
Gene name: RAD52
Description: DNA repair and recombination protein RAD52
Browser: contigB:3968318-3970286-
RNA-seq: read pairs 535, FPKM 10.1, percentile rank 26.1% (100% = highest expression)
Protein function
| Annotation: | RAD52 | DNA repair and recombination protein RAD52 | |
|---|---|---|---|
| KEGG: | K10873 | RAD52 | DNA repair and recombination protein RAD52 |
| EGGNOG: | 0PHXY | RAD52 | Dna repair and recombination protein |
| SGD closest match: | S000004494 | RAD52 | DNA repair and recombination protein RAD52 |
| CGD closest match: | CAL0000180590 | RAD52 | Recombinase |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| UniRef50_A0A1E4S6X6 | 50.60% | 166 | 6e-53 | Recombination protein Rad52 n=3 Tax=Cyberlindnera TaxID=604195 RepID=A0A1E4S6X6_CYBJA |
| A0A0J9X3B9_GEOCN | 52.35% | 170 | 1e-54 | Similar to Saccharomyces cerevisiae YML032C RAD52 Protein that stimulates strand exchange by facilitating Rad51p binding to single-stranded DNA OS=Geotrichum candidum GN=BN980_GECA01s02397g PE=4 SV=1 |
| A0A1E3PJ17_9ASCO | 56.03% | 141 | 3e-50 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_51447 PE=4 SV=1 |
| MIA_01497_1 | 47.02% | 168 | 2e-50 | MIA_01497_1 |
| RAD52_YEAST | 45.13% | 195 | 1e-47 | DNA repair and recombination protein RAD52 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RAD52 PE=1 SV=2 |
| A0A161HL63_9ASCO | 51.95% | 154 | 1e-46 | Recombinase RAD52 OS=Sugiyamaella lignohabitans GN=RAD52 PE=4 SV=1 |
| Q6C357_YARLI | 45.56% | 169 | 7e-45 | YALI0F02431p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F02431g PE=4 SV=1 |
| Q59NG2_CANAL | 46.79% | 156 | 6e-43 | Recombinase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RAD52 PE=4 SV=1 |
| A0A060TCG3_BLAAD | 44.31% | 167 | 2e-39 | ARAD1B23606p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B23606g PE=4 SV=1 |
| A0A1E4TFN8_9ASCO | 41.84% | 98 | 2e-22 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_24941 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1822
Predicted cleavage: 19
Protein family membership
- DNA repair protein Rad52/59/22 (IPR007232)
Domains and repeats
None predicted.
Detailed signature matches
-
-
PF04098 (Rad52_Rad22)
-
no IPR
Unintegrated signatures
-
SSF54768 (dsRNA-bin...)
-
mobidb-lite (disord...)
Protein sequence
>MCA_03301_1 MSNSHPTLHQSGQLIARNGTDNSKVNDFQEGIGSTQDKKDWHPAQISAIQGRLGRHLGAELITDRPAPGGGRVAYIEGWQ AIALANDTFGFDGWSTEIKSIQIDHQGEQNKRHTILISAIVRVTLKNGTYHEDIGCGSAENSSSRTQAFEKAKKEAVTDA LKRTLRQFGNGLGNCLYDRAYSTRIIRSKSAKRKWDESEFIHTTDFDAGKREIEEWEQNQQFGPYDSQNHLMKSIPARSN TAPPFESGVAEKLAGLKRSSPDSTIIQPSPRKMISPGSSKNQGPRSVRRNNGSPLKTESKTEEAVIKNENNNLSDWDSDF DDDLIFPPDEFDIPAFTKPVENEETLTEEQKPLELEKTNNTANNNTNPNTEVANTPDESKKQLTEKPDSSNDSEKENEYL FKNDKSQHTPNSNSKPIHHEITFFKATAATKILNDDVVPSDLEFDPSFESPIRRTLAHNKSVKIYRSEVSDIVSSKTSPA AKTPLLPTSSNNQQNKTTNGVSTSSNGNGNLVRRSNSPINSSSSSRSSRSSTPTNTTNGKSLANQTNGINDSVAFLEADA PSPHSSSSTGNSSNTTSLQVNNEVLTKPSTITTPSPSNGISTTIAGVPNGFQGGNRAFGSPRNGSRTLGMPPPHNQPVLR NKRYNNPNTTSRKSS
GO term prediction
Biological Process
GO:0006281 DNA repair
GO:0006310 DNA recombination
Molecular Function
None predicted.
Cellular Component
None predicted.