Protein
MCA_03297_1
Length
801 amino acids
Gene name: NSP1
Description: Nucleoporin NSP1
Browser: contigB:3957504-3959974-
RNA-seq: read pairs 4589, FPKM 70.7, percentile rank 72.9% (100% = highest expression)
Protein function
| Annotation: | NSP1 | Nucleoporin NSP1 | |
|---|---|---|---|
| KEGG: | K14306 | NUP62 | nuclear pore complex protein Nup62 |
| EGGNOG: | 0PGJ5 | NSP1 | nucleoporin nsp1 |
| SGD closest match: | S000003577 | NSP1 | Nucleoporin NSP1 |
| CGD closest match: | CAL0000175140 | NSP1 | FG-nucleoporin |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_05115_1 | 48.35% | 575 | 2e-138 | MIA_05115_1 |
| A0A0J9X4C7_GEOCN | 46.67% | 435 | 2e-100 | Similar to Saccharomyces cerevisiae YJL041W NSP1 FG-nucleoporin component of central core of the nuclear pore complex (NPC) OS=Geotrichum candidum GN=BN980_GECA02s04179g PE=4 SV=1 |
| UniRef50_A0A0J9X4C7 | 46.67% | 435 | 4e-97 | Similar to Saccharomyces cerevisiae YJL041W NSP1 FG-nucleoporin component of central core of the nuclear pore complex (NPC) n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X4C7_GEOCN |
| A0A161HF51_9ASCO | 39.65% | 628 | 8e-100 | FG-nucleoporin NSP1 OS=Sugiyamaella lignohabitans GN=NSP1 PE=4 SV=1 |
| A0A060TFF7_BLAAD | 49.02% | 459 | 2e-99 | ARAD1D15070p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D15070g PE=4 SV=1 |
| A0A1E3PJ69_9ASCO | 38.63% | 554 | 7e-86 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_83431 PE=4 SV=1 |
| Q6CFX8_YARLI | 46.61% | 236 | 1e-61 | YALI0B02706p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B02706g PE=4 SV=1 |
| NSP1_YEAST | 32.96% | 534 | 5e-42 | Nucleoporin NSP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NSP1 PE=1 SV=1 |
| A0A1D8PGV7_CANAL | 29.29% | 594 | 3e-34 | FG-nucleoporin OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=NSP1 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0042
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Repeat
1
100
200
300
400
500
600
700
801
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_03297_1 MSNQDNKDNQNKPPIFNFGNNNNSTTPAGNPSSSSNAFAFGSDANSKPAFNFGGTSNNDNNNKSSTTGTTNSSLFGGSGF GNSNNNTTTTTTTSSLSLFSKPTTSGPSFGNTEKKDDSKPATSLFGSTSSSTTPSLFGTSSAFGTKSNDDSSSTQPKSLF GSGSTFGSNSNDKTQSKPLFGSGSSAFGSQSNDSNQAKPLFGGGSSTTTSTFGSTNATSSTTTNTNLFSQGSQSSSAKPA FGSGSNLFGQSNTNLSDTNKETPKLTFGSATTDASKKPEEKKEESKPLFGSGSGGSLFGSKPASSDASKPLFGSTPSSGS LFGGASKTGDNNSNTSKPLFGSTPSTGGSLFGSTNTSSEKKDDSKSLFSSGGFGAKTDSSAGNLFGGADKKDDKPAGNIF GAKTDDKPAGSLFGGTANKDDKPAGNLFGAKKDDKPAGSLFGTKINDKPAGGLFGAKTDDKPAGSLFGTKINDKPAGNLF GSAAKTEDKPAGSLFGSSDKKSDDKPADNLFGSAATSTSTGGNLFGAKTEEKTESKDKPSDLSKPDATNKVDPKEAANLA AKKTSKLTVPTEQEVASYLQNRSLEDIIAKWTNALTKRSAEFQSQAADIAAWDKVLAENGDRISQMYTDVILAERKQSSI DQTLDYITRQQDDVDALLERYEAQANEFLADLAGPDGLQPVDQEREKAYRLAEELDGKIGAMSNNLETVINEINEVSTDL TDGRAAHDRKGANKGGPDSGNSGSSVSILGGSSDDPITQIIKILNAHLSSLQWIDTNTTELQEKLDQIEQLKNQGSRMLK N
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.