MCA_03256_1

Browser: contigB:3820221-3822821+

RNA-seq: read pairs 99, FPKM 1.4, percentile rank 10.4% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1685

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. NON_CYTOPLASM... (N...)
   22 - 848

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
2. SIGNAL_PEPTIDE (Sig...)
   1 - 21

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
3. SIGNAL_PEPTID... (S...)
   15 - 21

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
4. SIGNAL_PEPTID... (S...)
   3 - 14

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
5. SIGNAL_PEPTID... (S...)
   1 - 2

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
6. SignalP-noTM
   1 - 21

   SignalP euk
   SignalP-noTM (SignalP-noTM)
7. mobidb-lite (disord...)
   580 - 651

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   262 - 377

   MobiDB Lite
   mobidb-lite (disorder_prediction)

Protein sequence

>MCA_03256_1
MKLFSSLAFFVGALQLQSSLASPIVSLPERYDASFTTQNNALDFFDIMNPKIKRQYAQCPNAVDIDSGACVPDISGFTNT
ACNMWCQNLYDQLTYNTQDYICDSSTGNPLYDTNFWGGHLEVCLRCSSGRNLRYGNLVQDLARYCKRNFNTESCSGASLI
IREKRFPEYHDPKRCGSACTNLINQIWDYYNNPLEGWREVHACWDDMLYGQKLSACKYACTAPINNWNLYERHTNACPYF
VPNTFWTPNICRIEPTSSTTLLTSTRTTSSLKPASSDSEISSNDSSKTEISNSSSSTNDNGSSTNEASSTDGANVSSTDG
SNASSTDDANASSTDNSNASSTGDSNASSTGDFSESFTDSASASSTDSAEPTQCPDAVDVNSGACLPDIKSFTDTACDMW
CENLYSGTNDDAVGGHFCDAEGNPYKGVKFWSGHLEVCLQCSRGRGLTYGNRIQSLARRCKKNYNTKICSESALKLNDTS
NVAKYHDPELCGKACTSLINRIWGFYNDPKPGWREVHACWDDMLYGQRLSACKYACTAPINNWNLYERHTNACPYFVPNT
FWTENICRIDQVSSTLLTTTTTTSGLEPASSESDISSGESTSNTDISNGSSSTNDNGSSTNEASSTDGSNASFTDSTSAS
STDSAEPTQCPDAVDVNSGACLPDIKSFTDTACDMWCENLYSGTNDDAVGGHFCDAEGNPYKGVKFWSGHLEVCLQCSRG
RGLTYGNRIQSLARRCKKNYNTKICSESALRLNDTGKYAEFHDPERCGRSCTNLINEIWGFYTDSNPTWKIVHACWDDML
YGQRLSACKYACTAPINNWNLYERHTNACPYFHTSNDNDYNEWFRTSK

GO term prediction