MCA_03253_1

Browser: contigB:3804951-3805830+

RNA-seq: read pairs 1, FPKM 0.0, percentile rank 2.2% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0138

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. CYTOPLASMIC_D... (C...)
   292 - 292

   PHOBIUS
   CYTOPLASMIC_DOMAIN (Cytoplasmic domain)
2. NON_CYTOPLASM... (N...)
   23 - 268

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
3. SIGNAL_PEPTIDE (Sig...)
   1 - 22

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
4. SIGNAL_PEPTID... (S...)
   18 - 22

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
5. SIGNAL_PEPTID... (S...)
   8 - 17

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
6. SIGNAL_PEPTID... (S...)
   1 - 7

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
7. SignalP-noTM
   1 - 22

   SignalP euk
   SignalP-noTM (SignalP-noTM)
8. TMhelix
   269 - 291

   TMHMM
   TMhelix (TMhelix)

   4 - 26

   TMHMM
   TMhelix (TMhelix)
9. TRANSMEMBRANE (Tran...)
   269 - 291

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)
10. mobidb-lite (disord...)
    194 - 213

    MobiDB Lite
    mobidb-lite (disorder_prediction)

Protein sequence

>MCA_03253_1
MKTLRFDIILLFLSMLTSFVFAGVAIDKQKEAVNSKGLLRKAKLIHRDDDELYENEDNVETSSSISRSIVILRSTIPNDG
PVTQKLTIRKSATPVEEDTSGPITQVMVVGPPLVFQPETITENEDQLSTTSSDNIEETIVTSTVRVYLSSSERSVFETEL
ISSETGLPLSSFKPEVESSQSTDEFTTTVVAESLDRSTESEKTFDEPSSTQSSSTSFLSVITLTSISVSTKPSSTISSQS
SQSSNSINFVDIITSAGSTSSSSAFVSESWVICYKVLSAIILMQIIIVVLIF

GO term prediction