Protein
MCA_03183_1
Length
434 amino acids
Description: Reverse transcriptase
Browser: contigB:3578308-3579613-
RNA-seq: read pairs 112, FPKM 3.2, percentile rank 14.0% (100% = highest expression)
Protein function
Annotation: | Reverse transcriptase | ||
---|---|---|---|
EGGNOG: | 0PGPZ | to reverse transcriptase | |
SGD closest match: | S000007347 | TY3B-G | Transposon Ty3-G Gag-Pol polyprotein |
CGD closest match: | CAL0000175689 | POL93 | Pol93p |
Protein alignments
%id | Aln length | E-value | ||
---|---|---|---|---|
A0A060T683_BLAAD | 40.11% | 369 | 5e-83 | ARAD1B13926p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B13926g PE=4 SV=1 |
UniRef50_A0A060T683 | 40.11% | 369 | 1e-79 | ARAD1B13926p n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060T683_BLAAD |
YG31B_YEAST | 37.96% | 353 | 2e-61 | Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-G PE=1 SV=3 |
B5FVH8_YARLI | 32.88% | 368 | 4e-52 | YALI0E14388p2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E14388g2 PE=4 SV=1 |
A0A161HH93_9ASCO | 28.40% | 338 | 2e-34 | Gag-pol fusion protein OS=Sugiyamaella lignohabitans GN=AWJ20_4269 PE=4 SV=1 |
A0A1D8PC70_CANAL | 26.25% | 301 | 1e-28 | Pol93p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=POL93 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.2266
Predicted cleavage: 43
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
300
350
400
434
Detailed signature matches
Protein sequence
>MCA_03183_1 MASVVLSINPLSNNHCPDCAYTQPNKKTHGYLQPLQIPQQRWDSISLDFVSGLPEVDGYDMILVVVDRLSKRARFLPTTK TLTGKDCAYLLHREIFKIHGFPLDIVSDRDVRFQELFWKTMHLINGTKNLQSTSFHPETDGQTERVNRVLRALMSSHAVQ YGFNWPFHLATLEFSYNSTFQATIRASPFMADLGRVPRNPSFITPPMSFTGKIEAEDFAIITQAILARTRDFIAEAQDKQ SLYANKTRTALVLKENDEVLVRYAYSLAPNSNKYIDSVNLFTGPYRVVKKIDDNVYEIDLPEYDRSRRNINVSRLKKFEP SEAFPRSPPLNLEAVKARSTEISGIVGETDDAYLLQFSNCRPGHIVAVNKQVLNLLSPAEQERIKRNANAMTRNLMTHPD LAKEQFTHNQHLWRNQALSFFNQEQINHMNRDDS
GO term prediction
Biological Process
GO:0015074 DNA integration
Molecular Function
GO:0003676 nucleic acid binding
Cellular Component
None predicted.