Protein

MCA_03182_1

Length
408 amino acids

Description: protein with Harbinger transposase-derived nuclease domain (endonuclease of the DDE superfamily)

Browser: contigB:3572989-3574216-

RNA-seq: read pairs 0, FPKM 0.0, percentile rank 0.8% (100% = highest expression)

Protein function

Annotation:protein with Harbinger transposase-derived nuclease domain (endonuclease of the DDE superfamily)
EGGNOG:0PQVRInherit from KOG: transposon protein

Protein alignments

%idAln lengthE-value
UniRef50_A0A0N7KMU741.93%3532e-71Os07g0116050 protein n=13 Tax=BOP clade TaxID=359160 RepID=A0A0N7KMU7_ORYSJ
MIA_01706_126.86%3762e-17MIA_01706_1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.8861
Predicted cleavage: 57

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 50 100 150 200 250 300 350 408

Detailed signature matches

  1. Domain IPR027806
    Harbinger transposase-derived nuclease domain
    1. PF13359 (DDE_Tnp_4)
Unintegrated signatures no IPR
Unintegrated signatures
  1. NON_CYTOPLASM... (N...)
  2. SIGNAL_PEPTIDE (Sig...)
  3. SIGNAL_PEPTID... (S...)
  4. SIGNAL_PEPTID... (S...)
  5. SIGNAL_PEPTID... (S...)
  6. TMhelix

Protein sequence

>MCA_03182_1
MAQITKVTKKSLENLSLKRKKALLFVVLHHHILLRKALAIQMLMIIIMASSCRFRNVVLDSTLRGPLFVLELLNGNPSRM
FSILRMTPDCFIKLSAFLSERTSLKDTRITVEEKLAIFLYISANNSSNRCAQDQFQRGGGTISTIFRQVVKALLSIRNEV
IEAPRHEEFDAVTESPMTYFRNCIGAIDGTHIPITMPKGQERYRCRKGFPSLNVMVVVDFNMKFRHGHSGWEGSAHDSRV
LQHALNEKFFVIPDGTYYLADGGYGISSNILTPYRNVRYHLKEHGTNTPKTAEELFNLRHSSLRNHAERTIGKFKKRFRI
MKEGSEYSPKLVAYLVKSLAVVHNFIQDYNTTLAANQILAEEQELGRDNVNFDNSNESPAYEFSEKLRALGRSKREAITR
EMWQDYKR

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.