Protein

MCA_03178_1

Length
408 amino acids

Description: protein with Harbinger transposase-derived nuclease domain (endonuclease of the DDE superfamily)

Browser: contigB:3559377-3560660+

RNA-seq: read pairs 0, FPKM 0.0, percentile rank 0.8% (100% = highest expression)

Protein function

Annotation:protein with Harbinger transposase-derived nuclease domain (endonuclease of the DDE superfamily)
EGGNOG:0PQVRInherit from KOG: transposon protein

Protein alignments

%idAln lengthE-value
UniRef50_T1N3E946.01%2762e-65Uncharacterized protein n=2 Tax=Triticum urartu TaxID=4572 RepID=T1N3E9_TRIUA
MIA_01706_126.03%2421e-08MIA_01706_1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.9136
Predicted cleavage: 45

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 50 100 150 200 250 300 350 408

Detailed signature matches

  1. Domain IPR027806
    Harbinger transposase-derived nuclease domain
    1. PF13359 (DDE_Tnp_4)
Unintegrated signatures no IPR
Unintegrated signatures
  1. CYTOPLASMIC_D... (C...)
  2. NON_CYTOPLASM... (N...)
  3. TMhelix
  4. TRANSMEMBRANE (Tran...)
  5. mobidb-lite (disord...)

Protein sequence

>MCA_03178_1
MAQITKVTKKSLEKLSLKKRKALLFVVLHQHILLRKFVAIQMLMIMMMVSSCRLTNIVHDSALRGPAFVLELINGDPTRM
FDILRVVPACFIKLSNFLSERTSLKGTKTITVEEKLAFFLYISANISSNRCAQDRFQRSGYTISLEALFSLRNEVIEAPK
HEEFDEVAKPTTKYFKNCIGAIDGTHIPITMPKGRESYRCRKGFPSLNVMVVVDFNMKFRNVHSGWEGSAHDSRVLEDAI
HKKYFVIPDGTYYLADGGYGISEKIMTPYRNVRYHLKEYGNNLPKTDEELFNLRHSSLRNVVERTIGKFKKRFRIMKETS
EYSSKLVARWKTTIQLQTITEAEKIFEIYNDDDAGGGDDDDDDDDDSNNNESPNDETSEESRTLGRDNRGSICTEMWRVF
DRSSGVVI

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.